RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SERHLQ9NQF3 203 aa11.11□□□□□ -0.63
SLC28A1-204ENST00000538177 A0A096LPI6 279 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 KRT87PA6NCN2 255 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 PSMD11O00231 422 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 TSPAN6O43657 245 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ATG13O75143 517 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 GMNNO75496 209 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 OR6B1O95007 311 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 PRSS23O95084 383 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ELFN1P0C7U0 828 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 RAP2AP10114 183 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ATP6V1B1P15313 513 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 AMD1P17707 334 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 SDC1P18827 310 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 MYF6P23409 242 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 S100A3P33764 101 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 HALP42357 657 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 HNRNPFP52597 415 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 NR1H2P55055 460 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 PCDH1Q08174 1060 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CHIT1Q13231 466 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 MAP7Q14244 749 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 SLC36A3Q495N2 470 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 NADK2Q4G0N4 442 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 FAM98BQ52LJ0 330 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ATG9BQ674R7 924 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ERAP2Q6P179 960 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 PSRC1Q6PGN9 363 aaPredicted RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 PARS2Q7L3T8 475 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 SPRED2Q7Z698 418 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 OR10A6Q8NH74 314 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ITFG1Q8TB96 612 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ZFAND2BQ8WV99 257 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ATL1Q8WXF7 558 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 AP2M1Q96CW1 435 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CCM2Q9BSQ5 444 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 MYRFQ9Y2G1 1151 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 A0A1B0GTW7 788 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ELOVL7A1L3X0 281 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 EI24O14681 340 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 WNT9AO14904 365 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CLOCKO15516 846 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 SCELO95171 688 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ADH1CP00326 375 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 HOXB9P17482 250 aaPredicted RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 TACR1P25103 407 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 MAP4P27816 1152 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ST8SIA6P61647 398 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 IRF8Q02556 426 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 TMEM115Q12893 351 aaPredicted RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ABRQ12979 859 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ACOX1Q15067 660 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 POM121L1PQ3SYA9 428 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 PYCR3Q53H96 274 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 TCEAL5Q5H9L2 206 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 SLC30A9Q6PML9 568 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 MSANTD1Q6ZTZ1 278 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CYP2U1Q7Z449 544 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 NLRP8Q86W28 1048 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 THOC6Q86W42 341 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 C12orf40Q86WS4 652 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CALHM3Q86XJ0 350 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ETFBKMTQ8IXQ9 262 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ZNF366Q8N895 744 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 FAM47BQ8NA70 645 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 HM13Q8TCT9 377 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 TMEM159Q96B96 161 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 RSPRY1Q96DX4 576 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 APIPQ96GX9 242 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 ITCHQ96J02 903 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CCDC138Q96M89 665 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 COQ10AQ96MF6 247 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 HAUS8Q9BT25 410 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 EPHX3Q9H6B9 360 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 KAT8Q9H7Z6 458 aaKnown RBP11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 RMND5AQ9H871 391 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 NTN4Q9HB63 628 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CD320Q9NPF0 282 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 DPP7Q9UHL4 492 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 PCDHB14Q9Y5E9 798 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 COMMD3-BMI1R4GMX3 469 aa11.1□□□□□ -0.63
SLC28A1-204ENST00000538177 CROCCQ5TZA2 2017 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 H0Y858 1186 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 UPK1AO00322 258 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 VILLO15195 856 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 GSTA4O15217 222 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 DEAF1O75398 565 aaPredicted RBP11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 MT-ND1P03886 318 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 CD22P20273 847 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 PTPN6P29350 595 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 MAPK9P45984 424 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 RPS9P46781 194 aaKnown RBP11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 GZMMP51124 257 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 CHRNB3Q05901 458 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 CSTF3Q12996 717 aaKnown RBP11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
SLC28A1-204ENST00000538177 SYTL3Q4VX76 610 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms