RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ROPN1LQ96C74 230 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ISOC1Q96CN7 298 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 NTMT1Q9BV86 223 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 CLK4Q9HAZ1 481 aaKnown RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 RIC8BQ9NVN3 520 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 FAF1Q9UNN5 650 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 NDUFAF1Q9Y375 327 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 LOC730098B7Z3J9 87 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 H0YJX3 145 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 GFYI3L273 518 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 SYNCRIPO60506 623 aaKnown RBP10.46□□□□□ -0.73
CLIP1-210ENST00000538120 AP2A2O94973 939 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 FOSL1P15407 271 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 ST8SIA6P61647 398 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 C16orf72Q14CZ0 275 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 RPS6KA2Q15349 733 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 ZNF786Q8N393 782 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 CBR4Q8N4T8 237 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 BTN2A2Q8WVV5 523 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 COQ10AQ96MF6 247 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 UCN2Q96RP3 112 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 UHRF1Q96T88 793 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-210ENST00000538120 FAM129BQ96TA1 746 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 ZSCAN5AQ9BUG6 496 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 TRPV4Q9HBA0 871 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 HEBP1Q9NRV9 189 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 EGFL7Q9UHF1 273 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 AURKCQ9UQB9 309 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 CDH23Q9H251 3354 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 PLXNA2O75051 1894 aa10.46□□□□□ -0.73
CLIP1-210ENST00000538120 ANKRD12Q6UB98 2062 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 KRT87PA6NCN2 255 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 PABPN1LA6NDY0 278 aaKnown RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 TMEM202A6NGA9 273 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 KPNA3O00505 521 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 STK16O75716 305 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 SLC22A3O75751 556 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 C8GP07360 202 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 ANXA5P08758 320 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 ENO2P09104 434 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 XPAP23025 273 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 SOX11P35716 441 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 ARL1P40616 181 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 PIK3CGP48736 1102 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 CTSCP53634 463 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 EMX2Q04743 252 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 BOP1Q14137 746 aaKnown RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 RCAN2Q14206 197 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 HNRNPA1L2Q32P51 320 aaKnown RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 COQ5Q5HYK3 327 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 TANGO2Q6ICL3 276 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 PPP4R4Q6NUP7 873 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 ZBTB46Q86UZ6 589 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 DHFR2Q86XF0 187 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 RASGEF1AQ8N9B8 481 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 FNDC5Q8NAU1 212 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 PCYOX1LQ8NBM8 494 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 PROKR1Q8TCW9 393 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 TSPEARQ8WU66 669 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 VPS33AQ96AX1 596 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 C12orf43Q96C57 262 aaKnown RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 VPS35Q96QK1 796 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 ACTL8Q9H568 366 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 PARVBQ9HBI1 364 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 TRPV5Q9NQA5 729 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 PFDN4Q9NQP4 134 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 RAD18Q9NS91 495 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 FARSBQ9NSD9 589 aaKnown RBP10.46□□□□□ -0.74
CLIP1-210ENST00000538120 ARL15Q9NXU5 204 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 DEC1Q9P2X7 70 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 TRPS1Q9UHF7 1281 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 HCN2Q9UL51 889 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 ANGPTL3Q9Y5C1 460 aa10.46□□□□□ -0.74
CLIP1-210ENST00000538120 A0A1W2PP18 115 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 BOLA2-SMG1P6H3BVE0 249 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 PLK4O00444 970 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ATP6V1G1O75348 118 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ATE1O95260 518 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SOD1P00441 154 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ELFN1P0C7U0 828 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 EBLN1P0CF75 366 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 MSH3P20585 1137 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SLC6A12P48065 614 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 TRAP1Q12931 704 aaKnown RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ATP6AP1LQ52LC2 224 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 RFTN2Q52LD8 501 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 FNDC3BQ53EP0 1204 aaKnown RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 PAGE3Q5JUK9 113 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ERAP2Q6P179 960 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 RNF165Q6ZSG1 346 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 GPR180Q86V85 440 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SPPL2CQ8IUH8 684 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 MINDY1Q8N5J2 469 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 TMIEQ8NEW7 156 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 NUDT8Q8WV74 236 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ELMO1Q92556 727 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 NELL1Q92832 810 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 GLYATL1Q969I3 302 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 TIFAQ96CG3 184 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 P2RY13Q9BPV8 354 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms