RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RASAL1O95294 804 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 MYOGP15173 224 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 PREPP48147 710 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 EIF4HQ15056 248 aaKnown RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 HNRNPA1L2Q32P51 320 aaKnown RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 TMEM220Q6QAJ8 160 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 ZNF765Q7L2R6 523 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 SLC22A15Q8IZD6 547 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 C12orf76Q8N812 135 aaPredicted RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 TESCQ96BS2 214 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 ITCHQ96J02 903 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 ZNF583Q96ND8 569 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 SEPHS2Q99611 448 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 ANKRD60Q9BZ19 345 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 OSBPL6Q9BZF3 934 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 EPHX3Q9H6B9 360 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 STOX2Q9P2F5 926 aaPredicted RBP15.23■□□□□ 0.03
MKS1-204ENST00000537529 DEC1Q9P2X7 70 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 PADI4Q9UM07 663 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 OAZ3Q9UMX2 235 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 MAN2B2Q9Y2E5 1009 aa15.23■□□□□ 0.03
MKS1-204ENST00000537529 A0A096LPI6 279 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 RNF103-CHMP3A0A140T963 221 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 SMIM31A0A1B0GVY4 71 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 PRRT4C9JH25 899 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 PRAMEF4O60810 478 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 CLPTM1O96005 669 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 PABPC4LP0CB38 370 aaKnown RBP15.22■□□□□ 0.03
MKS1-204ENST00000537529 SDC1P18827 310 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 PBLDP30039 288 aaPredicted RBP15.22■□□□□ 0.03
MKS1-204ENST00000537529 RPL5P46777 297 aaKnown RBP15.22■□□□□ 0.03
MKS1-204ENST00000537529 GPM6BQ13491 265 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 RUNDC3AQ59EK9 446 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 XKR6Q5GH73 641 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 NHSL2Q5HYW2 709 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 FAM78AQ5JUQ0 283 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 PRAMEF9Q5VWM5 478 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 KRT80Q6KB66 452 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 IYDQ6PHW0 289 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 AGTRAPQ6RW13 159 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 DNAJC14Q6Y2X3 702 aaPredicted RBP15.22■□□□□ 0.03
MKS1-204ENST00000537529 MSANTD1Q6ZTZ1 278 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 MSRB3Q8IXL7 192 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 NUS1Q96E22 293 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 PPP1R16AQ96I34 528 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 TSSK3Q96PN8 268 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 KCNH6Q9H252 994 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 PNPLA3Q9NST1 481 aa15.22■□□□□ 0.03
MKS1-204ENST00000537529 SPINT1O43278 529 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 AMD1P17707 334 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 BDKRB1P46663 353 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 SLC6A11P48066 632 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 BCL7AQ4VC05 210 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 FAM98BQ52LJ0 330 aaKnown RBP15.21■□□□□ 0.03
MKS1-204ENST00000537529 LRIF1Q5T3J3 769 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 C9orf64Q5T6V5 341 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ATG9BQ674R7 924 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 TMC5Q6UXY8 1006 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ADGRD2Q7Z7M1 963 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 NPAS3Q8IXF0 933 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ZNF548Q8NEK5 533 aaPredicted RBP15.21■□□□□ 0.03
MKS1-204ENST00000537529 SMARCD2Q92925 531 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ARRDC3Q96B67 414 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 MED8Q96G25 268 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 APIPQ96GX9 242 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 FCRL1Q96LA6 429 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 APOLD1Q96LR9 279 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 RNF145Q96MT1 663 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 SAMD11Q96NU1 681 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 PRPF18Q99633 342 aaKnown RBP15.21■□□□□ 0.03
MKS1-204ENST00000537529 BDH2Q9BUT1 245 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 CHID1Q9BWS9 393 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 EPB41L1Q9H4G0 881 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 GORASP2Q9H8Y8 452 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 SLC25A37Q9NYZ2 338 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 V9GYQ6 96 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 TRBV5-3A0A0A0MS03 114 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 PDLIM1O00151 329 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 PGM3O95394 542 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 HLA-EP13747 358 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 HNF4AP41235 474 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 CCR3P51677 355 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 NAE1Q13564 534 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ELAVL3Q14576 367 aaKnown RBP15.21■□□□□ 0.03
MKS1-204ENST00000537529 GRHL2Q6ISB3 625 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 NLRP8Q86W28 1048 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 TMEM132CQ8N3T6 1108 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 VN1R2Q8NFZ6 395 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 OR10A6Q8NH74 314 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 TFAP2CQ92754 450 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ASB16Q96NS5 453 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 PAIP1Q9H074 479 aaKnown RBP15.21■□□□□ 0.03
MKS1-204ENST00000537529 INVSQ9Y283 1065 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 COQ6Q9Y2Z9 468 aa15.21■□□□□ 0.03
MKS1-204ENST00000537529 ELOVL7A1L3X0 281 aa15.2■□□□□ 0.02
MKS1-204ENST00000537529 FAM220BPB1ANY3 271 aa15.2■□□□□ 0.02
MKS1-204ENST00000537529 AREL1O15033 823 aa15.2■□□□□ 0.02
MKS1-204ENST00000537529 RECQL5O94762 991 aaPredicted RBP15.2■□□□□ 0.02
MKS1-204ENST00000537529 SCELO95171 688 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms