RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ACTR5Q9H9F9 607 aaPredicted RBP16.56■□□□□ 0.24
SFSWAP-205ENST00000537164 IARS2Q9NSE4 1012 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-205ENST00000537164 GEMIN8Q9NWZ8 242 aaKnown RBP16.56■□□□□ 0.24
SFSWAP-205ENST00000537164 CIDEBQ9UHD4 219 aa16.56■□□□□ 0.24
SFSWAP-205ENST00000537164 AP1M2Q9Y6Q5 423 aa16.56■□□□□ 0.24
SFSWAP-205ENST00000537164 A0A1W2PPV9 198 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 ARHGEF33A8MVX0 844 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 TARM1B6A8C7 271 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 E7ESA3 106 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 GFYI3L273 518 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 NDC80O14777 642 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 ZNF749O43361 778 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 CAPN1P07384 714 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 F7P08709 466 aaPredicted RBP16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 RAB40ALP0C0E4 278 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 FAM87AP0C7U9 286 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 MPC1LP0DKB6 136 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 ERVK-10P10266 1014 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 PRKAR1AP10644 381 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 GABRB3P28472 473 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 PTPN4P29074 926 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 ELK3P41970 407 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 GCGRP47871 477 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 MPP1Q00013 466 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 TIAL1Q01085 375 aaKnown RBP eCLIP16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 ARHGAP19Q14CB8 494 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 HIF1AQ16665 826 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 RHBDD2Q6NTF9 364 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 CYHR1Q6ZMK1 362 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 SPATA4Q8NEY3 305 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 OR2A1Q8NGT9 310 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 OR9A1PQ8NGU1 263 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 ASB11Q8WXH4 323 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 INPP5DQ92835 1189 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 KRT12Q99456 494 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 GPR21Q99679 349 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 ACTL8Q9H568 366 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 FAM114A2Q9NRY5 505 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 STARD5Q9NSY2 213 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 INTS7Q9NVH2 962 aaKnown RBP16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 PLCL2Q9UPR0 1127 aa16.55■□□□□ 0.24
SFSWAP-205ENST00000537164 HEATR5BQ9P2D3 2071 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 TENM4Q6N022 2769 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 KRT87PA6NCN2 255 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 EFCAB8A8MWE9 144 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 KATNA1O75449 491 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 OR2B3O76000 313 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 AHSGP02765 367 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 CATP04040 527 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 FURINP09958 794 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 HSD17B2P37059 387 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 SKIV2L2P42285 1042 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 CCR10P46092 362 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 ARL4CP56559 192 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 RPS15P62841 145 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 SF1Q15637 639 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 TEDDM1Q5T9Z0 273 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 FCRL6Q6DN72 434 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 LCN10Q6JVE6 187 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 TLDC1Q6P9B6 456 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 SYVN1Q86TM6 617 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 SYTL1Q8IYJ3 562 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 C2orf73Q8N5S3 287 aaPredicted RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 N4BP2L2Q92802 583 aaPredicted RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 MR1Q95460 341 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 CLIP3Q96DZ5 547 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 PWWP2AQ96N64 755 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 ZNF285Q96NJ3 590 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 RUFY1Q96T51 708 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 NLNQ9BYT8 704 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 CHST8Q9H2A9 424 aa16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 ZC3H7BQ9UGR2 993 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 FARSAQ9Y285 508 aaKnown RBP16.54■□□□□ 0.24
SFSWAP-205ENST00000537164 FAM187AA6NFU0 413 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 VPS26AO75436 327 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 CASQ1P31415 396 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 GRIA3P42263 894 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 RPL21P46778 160 aaKnown RBP16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 POLE2P56282 527 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 ERV3-1Q14264 604 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 UGT8Q16880 541 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 DEFB110Q30KQ9 67 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 ATP1A1-AS1Q5TC04 95 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 LRRC8EQ6NSJ5 796 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 UGT3A1Q6NUS8 523 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 C16orf46Q6P387 395 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 FIGLAQ6QHK4 219 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 FAM198BQ6UWH4 519 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 FAM20CQ8IXL6 584 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 C17orf53Q8N3J3 647 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 OR2L3Q8NG85 312 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 APOBEC4Q8WW27 367 aaKnown RBP16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 ERP44Q9BS26 406 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 SPRTNQ9H040 489 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 EURLQ9NYK6 297 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 SRPK3Q9UPE1 567 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 POLHQ9Y253 713 aa16.53■□□□□ 0.24
SFSWAP-205ENST00000537164 KCNMB2Q9Y691 235 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms