RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 HMBOX1Q6NT76 420 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PPP4R4Q6NUP7 873 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZNF765Q7L2R6 523 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 HEATR4Q86WZ0 1026 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC15A3Q8IY34 581 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ALDH16A1Q8IZ83 802 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GALNT4Q8N4A0 578 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ULK4Q96C45 1275 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 VPS35Q96QK1 796 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LGR4Q9BXB1 951 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TRIM15Q9C019 465 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MUC13Q9H3R2 512 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PREBQ9HCU5 417 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RAD18Q9NS91 495 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 USP36Q9P275 1121 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GNPTGQ9UJJ9 305 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SCML1Q9UN30 329 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PCDHGB4Q9UN71 923 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DMTF1Q9Y222 760 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 OR1A2Q9Y585 309 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PCDHGB5Q9Y5G0 923 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PCYT1BQ9Y5K3 369 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 KNL1Q8NG31 2342 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NR5A2O00482 541 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC31A1O15431 190 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TRIM16O95361 564 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ESRRBO95718 433 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TSPAN12O95859 305 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 UROSP10746 265 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CHRM3P20309 590 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RPS3P23396 243 aaKnown RBP eCLIP12.61□□□□□ -0.393e-10■■□□□ 13.8
CDK5RAP3-202ENST00000536708 IGFALSP35858 605 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NSG1P42857 185 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CLCN7P51798 805 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RPS21P63220 83 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DPTQ07507 201 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TSNQ15631 228 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MAP7D1Q3KQU3 841 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DOK6Q6PKX4 331 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LAYNQ6UX15 382 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ERMP1Q7Z2K6 904 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CARM1Q86X55 608 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CPNE9Q8IYJ1 553 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PACRGLQ8N7B6 248 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RASGEF1AQ8N9B8 481 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SNX31Q8N9S9 440 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TP53I13Q8NBR0 393 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 KCNJ9Q92806 393 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TUBGCP3Q96CW5 907 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CHRDQ9H2X0 955 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PFDN4Q9NQP4 134 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 AIG1Q9NVV5 245 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ACTR3BQ9P1U1 418 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CIDEBQ9UHD4 219 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NCKAP1Q9Y2A7 1128 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GMEB1Q9Y692 573 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FRYLO94915 3013 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 A0A1W2PP18 115 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TMEM202A6NGA9 273 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 H0Y8X5 98 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ANGPT2O15123 496 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 HNRNPRO43390 633 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PI15O43692 258 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 VPS26AO75436 327 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 HGFP14210 728 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZXDAP98168 799 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 INPP5AQ14642 412 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 VPS26BQ4G0F5 336 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LYPLAL1Q5VWZ2 237 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FAM219BQ5XKK7 198 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 KIAA1161Q6NSJ0 714 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 HORMAD1Q86X24 394 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DDIASQ8IXT1 998 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LRRC58Q96CX6 371 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 KCNA7Q96RP8 456 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 C1QTNF2Q9BXJ5 285 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC17A9Q9BYT1 436 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TRIM54Q9BYV2 358 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BRINP2Q9C0B6 783 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GRIP2Q9C0E4 1043 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BTBD1Q9H0C5 482 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 OR2AG1Q9H205 316 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 C6orf106Q9H6K1 298 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PCTPQ9UKL6 214 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 INVSQ9Y283 1065 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PCDHB1Q9Y5F3 818 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PCDHA9Q9Y5H5 950 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PTGDR2Q9Y5Y4 395 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MYO15AQ9UKN7 3530 aa12.61□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CDC7O00311 574 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SEMA4FO95754 770 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LINC00032P0C843 101 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ATP1B2P14415 290 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ATP6V1B2P21281 511 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC6A2P23975 617 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PBLDP30039 288 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZFP36L2P47974 494 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CLDN2P57739 230 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms