RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CXCL10P02778 98 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 PRKACGP22612 351 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 PLA2G16P53816 162 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 B4GALNT1Q00973 533 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 BNIP3Q12983 259 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 ZXDCQ2QGD7 858 aaPredicted RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 ZDHHC20Q5W0Z9 365 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 XKR5Q6UX68 686 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 USP45Q70EL2 814 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 TMEM179BQ7Z7N9 219 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 ZC3H7AQ8IWR0 971 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 ELMOD1Q8N336 334 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 RNF217Q8TC41 542 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 CD99L2Q8TCZ2 262 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 TANKQ92844 425 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 ABTB1Q969K4 478 aaPredicted RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 ECHDC3Q96DC8 303 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 CLEC4EQ9ULY5 219 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 INSL5Q9Y5Q6 135 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 KCNE1BA0A087WTH5 132 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 NUAK1O60285 661 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 BCL10O95999 233 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 MAGEA2P43356 314 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 SLC6A12P48065 614 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 NEK2P51955 445 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 GBX1Q14549 363 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 CTU2Q2VPK5 515 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 ZNF691Q5VV52 312 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 RBM23Q86U06 439 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 SERPINA11Q86U17 422 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 C10orf111Q8N326 155 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 FRS2Q8WU20 508 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 VOPP1Q96AW1 172 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 MAGEB10Q96LZ2 347 aaPredicted RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 TSSK3Q96PN8 268 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 INPP5KQ9BT40 448 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 SUV39H2Q9H5I1 410 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 LTB4R2Q9NPC1 389 aa15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 TMEFF2Q9UIK5 374 aaPredicted RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 SAMD4AQ9UPU9 718 aaKnown RBP15.61■□□□□ 0.09
CHMP1A-202ENST00000535997 MICAL3Q7RTP6 2002 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 RFXANKO14593 260 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 GSNP06396 782 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 HTR1AP08908 422 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 CCDC159P0C7I6 412 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 SDC1P18827 310 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 CD70P32970 193 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 C21orf59P57076 290 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 HSPA14Q0VDF9 509 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 PGS1Q32NB8 556 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 CES5AQ6NT32 575 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 SHQ1Q6PI26 577 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 SMYD1Q8NB12 490 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 TMEM169Q96HH4 297 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 MCCC1Q96RQ3 725 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 MRPL17Q9NRX2 175 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 FAIMQ9NVQ4 179 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 INTS6Q9UL03 887 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 PABPN1LA6NDY0 278 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 EVPLLA8MZ36 301 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 GFYI3L273 518 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 SLC16A5O15375 505 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 MYCLP1P12525 358 aaPredicted RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 TACR1P25103 407 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 TRPC1P48995 793 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 BMXP51813 675 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 PPP1R8Q12972 351 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 ABRQ12979 859 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 PTCHD3Q3KNS1 767 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 CPZQ66K79 652 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 ANKRD34AQ69YU3 496 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 LAIR2Q6ISS4 152 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.6■□□□□ 0.091e-10■■□□□ 13.8
CHMP1A-202ENST00000535997 ANKRD46Q86W74 232 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 CHPFQ8IZ52 775 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 PGBD3Q8N328 593 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 FBLIM1Q8WUP2 373 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 SGCDQ92629 289 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 NODALQ96S42 347 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 TRIT1Q9H3H1 467 aaKnown RBP15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 PALMDQ9NP74 551 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 AASDHPPTQ9NRN7 309 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 RHBDL2Q9NX52 303 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 MAFFQ9ULX9 164 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 PPT2Q9UMR5 302 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 SH3BP1Q9Y3L3 701 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 SNX5Q9Y5X3 404 aa15.6■□□□□ 0.09
CHMP1A-202ENST00000535997 MPC1LP0DKB6 136 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 SRCP12931 536 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 ZNF12P17014 697 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 PRPS1L1P21108 318 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 ARHGDIAP52565 204 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 SEMG2Q02383 582 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 SPIDRQ14159 915 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 DPY19L1Q2PZI1 675 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 SPOUT1Q5T280 376 aaKnown RBP15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 FRG2Q64ET8 278 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 EGFL6Q8IUX8 553 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 BBS7Q8IWZ6 715 aa15.59■□□□□ 0.09
CHMP1A-202ENST00000535997 DDHD1Q8NEL9 900 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms