RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 GP9P14770 177 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 DARSP14868 501 aaKnown RBP3.54□□□□□ -1.84
VBP1-203ENST00000535916 HLA-FP30511 346 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 TMF1P82094 1093 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 CDK3Q00526 305 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 LMOD3Q0VAK6 560 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 G3BP1Q13283 466 aaKnown RBP eCLIP3.54□□□□□ -1.84
VBP1-203ENST00000535916 EFTUD2Q15029 972 aaKnown RBP eCLIP3.54□□□□□ -1.84
VBP1-203ENST00000535916 LCN1P1Q5VSP4 162 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 WDR78Q5VTH9 848 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 SNX30Q5VWJ9 437 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 GDPGP1Q6ZNW5 385 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 HAUS6Q7Z4H7 955 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 CCDC107Q8WV48 283 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 APOBEC4Q8WW27 367 aaKnown RBP3.54□□□□□ -1.84
VBP1-203ENST00000535916 TOMM40LQ969M1 308 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 HRH4Q9H3N8 390 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 FAM207AQ9NSI2 230 aaPredicted RBP3.54□□□□□ -1.84
VBP1-203ENST00000535916 ORC3Q9UBD5 711 aaPredicted RBP3.54□□□□□ -1.84
VBP1-203ENST00000535916 CTSZQ9UBR2 303 aa3.54□□□□□ -1.84
VBP1-203ENST00000535916 A8MXK9 166 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 CDRT15L2A8MXV6 281 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 PIK3R1P27986 724 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 NR1D2Q14995 579 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 TMCO3Q6UWJ1 677 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 G2E3Q7L622 706 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 LDB1Q86U70 411 aaPredicted RBP3.53□□□□□ -1.84
VBP1-203ENST00000535916 AACSQ86V21 672 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 KCNMB4Q86W47 210 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 METTL4Q8N3J2 472 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 LRRC59Q96AG4 307 aaKnown RBP3.53□□□□□ -1.84
VBP1-203ENST00000535916 ATXN7L3BQ96GX2 97 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 NKX3-1Q99801 234 aaPredicted RBP3.53□□□□□ -1.84
VBP1-203ENST00000535916 SLC26A6Q9BXS9 759 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 TDRD1Q9BXT4 1180 aaKnown RBP3.53□□□□□ -1.84
VBP1-203ENST00000535916 KCNK15Q9H427 330 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 SERINC1Q9NRX5 453 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 NRBP1Q9UHY1 535 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 STUB1Q9UNE7 303 aa3.53□□□□□ -1.84
VBP1-203ENST00000535916 LOC105371242A0A075B767 164 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 LRRC72A6NJI9 287 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 SHISA7A6NL88 538 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 C2orf81A6NN90 581 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 TRUB2O95900 331 aaKnown RBP3.52□□□□□ -1.85
VBP1-203ENST00000535916 VPREB1P12018 145 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ARL3P36405 182 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ETV5P41161 510 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 MNDAP41218 407 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ZFP36L2P47974 494 aaKnown RBP3.52□□□□□ -1.85
VBP1-203ENST00000535916 XGP55808 180 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 CXCL9Q07325 125 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ZNF415Q09FC8 603 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ZNF74Q16587 644 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ODF4Q2M2E3 257 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ZNF841Q6ZN19 808 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 MMS22LQ6ZRQ5 1243 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 SLC25A42Q86VD7 318 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 SCFD2Q8WU76 684 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 C1orf147Q96MC9 270 aaPredicted RBP3.52□□□□□ -1.85
VBP1-203ENST00000535916 MIS12Q9H081 205 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 HEXA-AS1Q9H8Q6 139 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 TBC1D17Q9HA65 648 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 ATRXP46100 2492 aa3.52□□□□□ -1.85
VBP1-203ENST00000535916 TDRD9Q8NDG6 1382 aaKnown RBP3.51□□□□□ -1.85
VBP1-203ENST00000535916 RUSC2Q8N2Y8 1516 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 SHISA9B4DS77 424 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 ZWINTO95229 277 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 JAK1P23458 1154 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 CHMP24386 653 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 OXTRP30559 389 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 EIPR1Q53HC9 387 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 UGT3A1Q6NUS8 523 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 Q8N7P7 452 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 USP6NLQ92738 828 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 NEK1Q96PY6 1258 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 SPAG5Q96R06 1193 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 FTOQ9C0B1 505 aaKnown RBP eCLIP3.51□□□□□ -1.853e-9■■□□□ 12.8
VBP1-203ENST00000535916 SPATC1LQ9H0A9 340 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 ZHX3Q9H4I2 956 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 B3GAT2Q9NPZ5 323 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 CLIP2Q9UDT6 1046 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 ZNF107Q9UII5 783 aaPredicted RBP3.51□□□□□ -1.85
VBP1-203ENST00000535916 PLAGL1Q9UM63 463 aa3.51□□□□□ -1.85
VBP1-203ENST00000535916 ANKUB1A6NFN9 424 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 GPRIN2O60269 458 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 PRAMEF11O60813 436 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 TM4SF1P30408 202 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 ACSL1P33121 698 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 CAPGP40121 348 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 CLCN4P51793 760 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 SIRPAP78324 504 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 MAMLD1Q13495 774 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 CEACAM19Q7Z692 300 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 FBXO39Q8N4B4 442 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 NAXEQ8NCW5 288 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 TYMSOSQ8TAI1 123 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 CNRIP1Q96F85 164 aaPredicted RBP3.5□□□□□ -1.85
VBP1-203ENST00000535916 CYYR1Q96J86 154 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms