RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CCR7P32248 378 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 ADARP55265 1226 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 SPARCL1Q14515 664 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 NAA25Q14CX7 972 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 OASLQ15646 514 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 CYP2A13Q16696 494 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 CCDC181Q5TID7 509 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 PRMT9Q6P2P2 845 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 ARHGEF18Q6ZSZ5 1173 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 ZNF534Q76KX8 674 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 TAS2R42Q7RTR8 314 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 OR11G2Q8NGC1 345 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 N4BP2L2Q92802 583 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 MVB12AQ96EY5 273 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 LHPPQ9H008 270 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 RNF32Q9H0A6 362 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 ILKAPQ9H0C8 392 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 FAM8A1Q9UBU6 413 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 FBXL4Q9UKA2 621 aa10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 NOVA2Q9UNW9 492 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 REXO2Q9Y3B8 237 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 SETD2Q9BYW2 2564 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-206ENST00000535668 FBN2P35556 2912 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 RASGRF2O14827 1237 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 KPNA5O15131 536 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 ERGP11308 486 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 TPH1P17752 444 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 ATP5DP30049 168 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 SOX11P35716 441 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 CARSP49589 748 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 PER3P56645 1201 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 TMPRSS15P98073 1019 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 GBX1Q14549 363 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 POU6F1Q14863 301 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 ZRSR2Q15696 482 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 AARS2Q5JTZ9 985 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 TSTD2Q5T7W7 516 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 C1QL3Q5VWW1 255 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 MYO7BQ6PIF6 2116 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 AFTPHQ6ULP2 937 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 TRIM73Q86UV7 250 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 LRRC6Q86X45 466 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 ARHGEF39Q8N4T4 335 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 FAM71DQ8N9W8 422 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 OR4L1Q8NH43 312 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 PSMF1Q92530 271 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 HAS2Q92819 552 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 HES6Q96HZ4 224 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 TSSK1BQ9BXA7 367 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 TGIF2Q9GZN2 237 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 LACRTQ9GZZ8 138 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 CUTCQ9NTM9 273 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 DUSP10Q9Y6W6 482 aa10.74□□□□□ -0.69
CLSTN3-206ENST00000535668 HIVEP1P15822 2718 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 A0A1B0GUH1 482 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 CCDC78A2IDD5 438 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 OR2A25A4D2G3 310 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 GRID2IPA4D2P6 1211 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 CDK2AP1O14519 115 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 PRMT5O14744 637 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 DDX3YO15523 660 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 OR1I1O60431 355 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 HPP00738 406 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 FDFT1P37268 417 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 CCNFP41002 786 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 GRIA3P42263 894 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 GDF10P55107 478 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 MFAP5Q13361 173 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 ELOAQ14241 798 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 ZNF169Q14929 603 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 SLC9A5Q14940 896 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 DEFB110Q30KQ9 67 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 TUBB8Q3ZCM7 444 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 C1orf189Q5VU69 101 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 ZNF787Q6DD87 383 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 FIGLAQ6QHK4 219 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 ISLR2Q6UXK2 745 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 RIPOR1Q6ZS17 1223 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 TTLL10Q6ZVT0 673 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 RNF44Q7L0R7 432 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 SYCE1Q8N0S2 351 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 OR2A1Q8NGT9 310 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 HDAC10Q969S8 669 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 RAD51AP1Q96B01 352 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 ALS2CR12Q96Q35 445 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 KLHL25Q9H0H3 589 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 P2RY12Q9H244 342 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 EIF2B3Q9NR50 452 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 TREX1Q9NSU2 369 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 LUZP4Q9P127 313 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 TFR2Q9UP52 801 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 PCDHGB6Q9Y5F9 930 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 KLF2Q9Y5W3 355 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 HEATR5BQ9P2D3 2071 aa10.73□□□□□ -0.69
CLSTN3-206ENST00000535668 DCHS2Q6V1P9 2916 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 LOC102723996A0A087X1L8 192 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 A0A1W2PPV9 198 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 ISM1B1AKI9 464 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 AP3B1O00203 1094 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms