RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SAMD4AQ9UPU9 718 aaKnown RBP15.52■□□□□ 0.08
MCF2L-232ENST00000535094 KCNH4Q9UQ05 1017 aa15.52■□□□□ 0.08
MCF2L-232ENST00000535094 SOBPA7XYQ1 873 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 UPK1AO00322 258 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 ENGP17813 658 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 GRK3P35626 688 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 YBEYP58557 167 aaPredicted RBP15.52■□□□□ 0.07
MCF2L-232ENST00000535094 C1QTNF12Q5T7M4 302 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 DESI1Q6ICB0 168 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 SLC16A12Q6ZSM3 486 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 RIMKLAQ8IXN7 391 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 OR6Q1Q8NGQ2 317 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 TMEM161AQ9NX61 479 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 GPRC5BQ9NZH0 403 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 BOLA1Q9Y3E2 137 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 PCDHGA10Q9Y5H3 936 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 CLIC1O00299 241 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 ITIH1P19827 911 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 DGKAP23743 735 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 CDH18Q13634 790 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 CARD16Q5EG05 197 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 THOC7Q6I9Y2 204 aaKnown RBP15.52■□□□□ 0.07
MCF2L-232ENST00000535094 GDF6Q6KF10 455 aaPredicted RBP15.52■□□□□ 0.07
MCF2L-232ENST00000535094 OR8J3Q8NGG0 315 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 SPATA17Q96L03 361 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 SMAD5Q99717 465 aaKnown RBP15.52■□□□□ 0.07
MCF2L-232ENST00000535094 BRINP2Q9C0B6 783 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 SLC6A13Q9NSD5 602 aa15.52■□□□□ 0.07
MCF2L-232ENST00000535094 MBLAC1A4D2B0 266 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 MYADML2A6NDP7 307 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 CREMQ03060 361 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 SLC14A2Q15849 920 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.51■□□□□ 0.072e-7■■■■□ 25.6
MCF2L-232ENST00000535094 ZNF691Q5VV52 312 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 FAM171BQ6P995 826 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 DACT3Q96B18 629 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 THUMPD1Q9NXG2 353 aaKnown RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 RNF6Q9Y252 685 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 DLGAP4Q9Y2H0 992 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 KNL1Q8NG31 2342 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 EFCAB10A6NFE3 127 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 TPD52L2O43399 206 aaKnown RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 RFPL2O75678 378 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 ANXA5P08758 320 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 JUNBP17275 347 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 TACR1P25103 407 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 HTR7P34969 479 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 RPIAP49247 311 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 CDH12P55289 794 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 TIAL1Q01085 375 aaKnown RBP eCLIP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 SMARCB1Q12824 385 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 FAM217AQ8IXS0 508 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 BRI3BPQ8WY22 251 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 MAL2Q969L2 176 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 HSH2DQ96JZ2 352 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 TP63Q9H3D4 680 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 PEX11BO96011 259 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 ESR1P03372 595 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 STSP08842 583 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 CCDC159P0C7I6 412 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 RPL17P18621 184 aaKnown RBP15.51■□□□□ 0.07
MCF2L-232ENST00000535094 CTSKP43235 329 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 PPP2R2BQ00005 443 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 SPIBQ01892 262 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 RUNX1T1Q06455 604 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 SUSD1Q6UWL2 747 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 NEK6Q9HC98 313 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 VNN3Q9NY84 501 aa15.51■□□□□ 0.07
MCF2L-232ENST00000535094 MTX2O75431 263 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 ATP5C1P36542 298 aaKnown RBP15.5■□□□□ 0.07
MCF2L-232ENST00000535094 PTGER3P43115 390 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 PPP5CP53041 499 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 GRIK2Q13002 908 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 VARS2Q5ST30 1063 aaKnown RBP15.5■□□□□ 0.07
MCF2L-232ENST00000535094 ITPKCQ96DU7 683 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 SLC25A37Q9NYZ2 338 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 LTBP3Q9NS15 1303 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 TRIM64CA6NLI5 447 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 HPRP00739 348 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 IRF8Q02556 426 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 ACSM2AQ08AH3 577 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 TTLL9Q3SXZ7 439 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 CTSL3PQ5NE16 218 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 MANEALQ5VSG8 457 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 ACSM2BQ68CK6 577 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 RNF38Q9H0F5 515 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 OR51E2Q9H255 320 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 TLR9Q9NR96 1032 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 DCAF13Q9NV06 445 aaKnown RBP15.5■□□□□ 0.07
MCF2L-232ENST00000535094 ERVK-11Q9UQG0 969 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 B3GNT3Q9Y2A9 372 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 PMF1-BGLAPU3KQ54 211 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 SSC5DA1L4H1 1573 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 MYO7AQ13402 2215 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 JRKO75564 520 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 CLDN9O95484 217 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 RRM2P31350 389 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 KRT20P35900 424 aa15.5■□□□□ 0.07
MCF2L-232ENST00000535094 CDKN2CP42773 168 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms