RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 LINC01553A4QN01 128 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 OTOL1A6NHN0 477 aaPredicted RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 RFXAPO00287 272 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 OLFM2O95897 454 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 RBP1P09455 135 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 CTSAP10619 480 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 GABRR2P28476 465 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 TGFBR1P36897 503 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 SLC1A2P43004 574 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 CLCN4P51793 760 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 RING1Q06587 406 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 SMARCB1Q12824 385 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 KRR1Q13601 381 aaKnown RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 GRM3Q14832 879 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 TOR2AQ5JU69 321 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 HECTD3Q5T447 861 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 ATXN7L2Q5T6C5 722 aaPredicted RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 ERICH5Q6P6B1 374 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 ZNF773Q6PK81 442 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 TPGS1Q6ZTW0 290 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 KCTD20Q7Z5Y7 419 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 MDGA1Q8NFP4 955 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 OR13C4Q8NGS5 318 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 TFAP2CQ92754 450 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 TRIB3Q96RU7 358 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 KCNS3Q9BQ31 491 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 LINC00597Q9H2U6 94 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 LRRC40Q9H9A6 602 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 SPATA6Q9NWH7 488 aaPredicted RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 ERVK13-1Q9NX77 482 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 GALPQ9UBC7 116 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 PCDHGC4Q9Y5F7 938 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 ZNF701M0R085 212 aaPredicted RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 FGF10O15520 208 aaPredicted RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 LDB2O43679 373 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 HS6ST1O60243 411 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 PRAMEF11O60813 436 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 KCNK2O95069 426 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 CXCL14O95715 111 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 MLNP12872 115 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 MAP2K4P45985 399 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 CYP4F2P78329 520 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 CYP4F3Q08477 520 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 CSTF3Q12996 717 aaKnown RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 AQP6Q13520 282 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 PIGGQ5H8A4 983 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 CNSTQ6PJW8 725 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 MAVSQ7Z434 540 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 SPPL3Q8TCT6 385 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 HDAC10Q969S8 669 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 SEMA3CQ99985 751 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 SLAMF7Q9NQ25 335 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 SIRPGQ9P1W8 387 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 DNMT3BQ9UBC3 853 aaKnown RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 SPATA2Q9UM82 520 aa8.83□□□□□ -1
SF3B2-216ENST00000534765 YBX2Q9Y2T7 364 aaKnown RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 FCF1Q9Y324 198 aaKnown RBP8.83□□□□□ -1
SF3B2-216ENST00000534765 FREM2Q5SZK8 3169 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 TRPC5OSA6NMA1 111 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 SMLR1H3BR10 107 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ANGPT2O15123 496 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 XPNPEP2O43895 674 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 OR2B3O76000 313 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 MYL4P12829 197 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ICAM2P13598 275 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 CD70P32970 193 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 POLR2IP36954 125 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 STK19P49842 368 aaPredicted RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 SMAD3P84022 425 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 RHDQ02161 417 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ELAVL2Q12926 359 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 GRM7Q14831 915 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 POU4F3Q15319 338 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 FAM91A1Q658Y4 838 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ZBTB44Q8NCP5 570 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 POF1BQ8WVV4 589 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 SLC5A11Q8WWX8 675 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 NODALQ96S42 347 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 BDH2Q9BUT1 245 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 KIFC1Q9BW19 673 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 C1QTNF1Q9BXJ1 281 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 MUC3BQ9H195 1237 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 DSN1Q9H410 356 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 CATSPERBQ9H7T0 1116 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 TNFRSF12AQ9NP84 129 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 PTBP2Q9UKA9 531 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 IKZF3Q9UKT9 509 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 MKL2Q9ULH7 1088 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 TMCC3Q9ULS5 477 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 KCNE2Q9Y6J6 123 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 U3KQV3 271 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 TRAV20A0A0B4J274 112 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 NOBOXO60393 691 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 DNTTP04053 509 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 PDGFAP04085 211 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 C8AP07357 584 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 IL7P13232 177 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 PKLRP30613 574 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms