RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 NAP1L1P55209 391 aaKnown RBP13.3□□□□□ -0.28
CCDC84-208ENST00000534656 HSPA14Q0VDF9 509 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 TLR1Q15399 786 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 ZRSR2Q15696 482 aaKnown RBP13.3□□□□□ -0.28
CCDC84-208ENST00000534656 RBBP7Q16576 425 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 SHISA6Q6ZSJ9 500 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 DCUN1D3Q8IWE4 304 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 SRRM1Q8IYB3 904 aaKnown RBP13.3□□□□□ -0.28
CCDC84-208ENST00000534656 TAB3Q8N5C8 712 aaPredicted RBP13.3□□□□□ -0.28
CCDC84-208ENST00000534656 TTC29Q8NA56 475 aaPredicted RBP13.3□□□□□ -0.28
CCDC84-208ENST00000534656 RNF214Q8ND24 703 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 OR11G2Q8NGC1 345 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 OR52K1Q8NGK4 314 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 CFAP61Q8NHU2 1237 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 ASZ1Q8WWH4 475 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 THOC3Q96J01 351 aaKnown RBP13.3□□□□□ -0.28
CCDC84-208ENST00000534656 CNDP1Q96KN2 507 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 ZNF285Q96NJ3 590 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 IL17FQ96PD4 163 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 TSPY26PQ9H489 355 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 CTSFQ9UBX1 484 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 CIDEBQ9UHD4 219 aa13.3□□□□□ -0.28
CCDC84-208ENST00000534656 HEATR9A2RTY3 570 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 FITM1A5D6W6 292 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 BTNL10A8MVZ5 291 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 TARM1B6A8C7 271 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 RASGRF2O14827 1237 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 PRICKLE3O43900 615 aaPredicted RBP13.29□□□□□ -0.28
CCDC84-208ENST00000534656 FKBP9O95302 570 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 PTMAP06454 111 aaKnown RBP13.29□□□□□ -0.28
CCDC84-208ENST00000534656 OR1D4P47884 311 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 Q0VFX4 171 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 CDH17Q12864 832 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 SF1Q15637 639 aaKnown RBP13.29□□□□□ -0.28
CCDC84-208ENST00000534656 FAM214AQ32MH5 1076 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 TSTD2Q5T7W7 516 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 RPUSD3Q6P087 351 aaKnown RBP13.29□□□□□ -0.28
CCDC84-208ENST00000534656 AFTPHQ6ULP2 937 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 ISLR2Q6UXK2 745 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 UNC5DQ6UXZ4 953 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 TAX1BP1Q86VP1 789 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 LRRC57Q8N9N7 239 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 DNAAF3Q8N9W5 541 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 SLC35B2Q8TB61 432 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 ZUFSPQ96AP4 578 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 LMF1Q96S06 567 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 SELENOSQ9BQE4 189 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 TMEM121Q9BTD3 319 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 TSSK1BQ9BXA7 367 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 SLC2A6Q9UGQ3 507 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 SLC39A10Q9ULF5 831 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 RIMKLBQ9ULI2 386 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 ENTPD4Q9Y227 616 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 EPN1Q9Y6I3 576 aaPredicted RBP13.29□□□□□ -0.28
CCDC84-208ENST00000534656 CENPEQ02224 2701 aa13.29□□□□□ -0.28
CCDC84-208ENST00000534656 ERI2A8K979 691 aaKnown RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 IQCF5A8MTL0 148 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 HNRNPRO43390 633 aaKnown RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 SRPX2O60687 465 aaPredicted RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 ZG16O60844 167 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 KLHL18O94889 574 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 SLCO2B1O94956 709 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 GAS8O95995 478 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 APOA4P06727 396 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 STSP08842 583 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 AOAHP28039 575 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 PPARGP37231 505 aaPredicted RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 CARSP49589 748 aaKnown RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 ACVR1Q04771 509 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 KLF1Q13351 362 aaPredicted RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 MFAP5Q13361 173 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 SP5Q6BEB4 398 aaPredicted RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 FAM180AQ6UWF9 173 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 LINC00696Q6ZRV3 163 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 ZNF534Q76KX8 674 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 METTL27Q8N6F8 245 aaPredicted RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 CATSPER1Q8NEC5 780 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 OR6P1Q8NGX9 317 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 LKAAEAR1Q8TD35 194 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 ZNF778Q96MU6 729 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 SLX1AQ9BQ83 275 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 RAB11FIP5Q9BXF6 653 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 ZNF304Q9HCX3 659 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 R3HDM2Q9Y2K5 976 aaKnown RBP13.28□□□□□ -0.28
CCDC84-208ENST00000534656 MAU2Q9Y6X3 613 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 CROCCQ5TZA2 2017 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 LRBAP50851 2863 aa13.28□□□□□ -0.28
CCDC84-208ENST00000534656 ANKRD12Q6UB98 2062 aa13.27□□□□□ -0.28
CCDC84-208ENST00000534656 CREBBPQ92793 2442 aa13.27□□□□□ -0.29
CCDC84-208ENST00000534656 A0A1B0GUH1 482 aa13.27□□□□□ -0.29
CCDC84-208ENST00000534656 GRID2IPA4D2P6 1211 aa13.27□□□□□ -0.29
CCDC84-208ENST00000534656 SOWAHDA6NJG2 315 aa13.27□□□□□ -0.29
CCDC84-208ENST00000534656 CTSVO60911 334 aa13.27□□□□□ -0.29
CCDC84-208ENST00000534656 HPP00738 406 aa13.27□□□□□ -0.29
CCDC84-208ENST00000534656 ADRA1DP25100 572 aa13.27□□□□□ -0.29
CCDC84-208ENST00000534656 VSX2P58304 361 aaPredicted RBP13.27□□□□□ -0.29
CCDC84-208ENST00000534656 KLC1Q07866 573 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms