RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 A6NL46 340 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 C1orf105O95561 183 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 RECKO95980 971 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 CAPN1P07384 714 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 MLNP12872 115 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 ALAS2P22557 587 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 CCNFP41002 786 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 GABRA4P48169 554 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 CTBP1Q13363 440 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 TLDC1Q6P9B6 456 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 FIGLAQ6QHK4 219 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 CILP2Q8IUL8 1156 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 MCATQ8IVS2 390 aaKnown RBP10.04□□□□□ -0.8
CAPN1-225ENST00000533704 SPNS2Q8IVW8 549 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 DENND6AQ8IWF6 608 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 TEX19Q8NA77 164 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 ACTRT1Q8TDG2 376 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 CAPZA3Q96KX2 299 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 MIPEPQ99797 713 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 DPH2Q9BQC3 489 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-225ENST00000533704 MENTQ9BUN1 341 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 SLC25A23Q9BV35 468 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 ACAT2Q9BWD1 397 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 DDX47Q9H0S4 455 aaKnown RBP10.04□□□□□ -0.8
CAPN1-225ENST00000533704 ING2Q9H160 280 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 C20orf96Q9NUD7 363 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-225ENST00000533704 ABCF3Q9NUQ8 709 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 IFT80Q9P2H3 777 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-225ENST00000533704 ANAPC2Q9UJX6 822 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 SNX12Q9UMY4 172 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 SRPK3Q9UPE1 567 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 PADI2Q9Y2J8 665 aa10.04□□□□□ -0.8
CAPN1-225ENST00000533704 PTRH2Q9Y3E5 179 aaKnown RBP10.04□□□□□ -0.8
CAPN1-225ENST00000533704 SETXQ7Z333 2677 aaKnown RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 DOPEY2Q9Y3R5 2298 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 MAGEB16A2A368 324 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 USP27XA6NNY8 438 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 USP1O94782 785 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 MCM3P25205 808 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 CASRP41180 1078 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 FOLR3P41439 243 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 SLC1A2P43004 574 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 FNTAP49354 379 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 CSRP3P50461 194 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 PGDP52209 483 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 FOXL2P58012 376 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 DCDP81605 110 aaKnown RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 MPP1Q00013 466 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 KLRB1Q12918 225 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 CUL1Q13616 776 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 ATP1A4Q13733 1029 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 FASTKQ14296 549 aaKnown RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 LONRF1Q17RB8 773 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 KLHL38Q2WGJ6 581 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 TTLL9Q3SXZ7 439 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 ZNF385CQ66K41 422 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 FCRL6Q6DN72 434 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 RHBDD2Q6NTF9 364 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 TCTN3Q6NUS6 607 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 TTLL10Q6ZVT0 673 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 RAB43Q86YS6 212 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 APLFQ8IW19 511 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 PPIL6Q8IXY8 311 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 METTL27Q8N6F8 245 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 NAT8LQ8N9F0 302 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 PROKR1Q8TCW9 393 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 ANP32BQ92688 251 aaKnown RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 PCSK5Q92824 1860 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 GBP5Q96PP8 586 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 C17orf62Q9BQA9 187 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 SELENOSQ9BQE4 189 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 CHRNA10Q9GZZ6 450 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 INTS10Q9NVR2 710 aaKnown RBP10.03□□□□□ -0.8
CAPN1-225ENST00000533704 NEU2Q9Y3R4 380 aa10.03□□□□□ -0.8
CAPN1-225ENST00000533704 CNTRLQ7Z7A1 2325 aa10.02□□□□□ -0.8
CAPN1-225ENST00000533704 A0A0J9YVX5 310 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 ZCWPW2A0A1B0GU75 182 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 ARHGEF33A8MVX0 844 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 H3BMH7 237 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 BANF1O75531 89 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SYF2O95926 243 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 CATP04040 527 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 PDGFAP04085 211 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 EIF2S1P05198 315 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 TCP1P17987 556 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 RPA3P35244 121 aaPredicted RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 VSX2P58304 361 aaPredicted RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 RAPSNQ13702 412 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 IGFBP7Q16270 282 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 NKAIN1Q4KMZ8 207 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 HSP90AA5PQ58FG0 334 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 ZC3H12BQ5HYM0 836 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 RNASEH2BQ5TBB1 312 aaKnown RBP10.02□□□□□ -0.81
CAPN1-225ENST00000533704 ARMC3Q5W041 872 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 SUSD1Q6UWL2 747 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
CAPN1-225ENST00000533704 AGGF1Q8N302 714 aaeCLIP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms