RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 DDA1Q9BW61 102 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 B3GNT4Q9C0J1 378 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 DERL2Q9GZP9 239 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 KLHL25Q9H0H3 589 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 APMAPQ9HDC9 416 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 THSD1Q9NS62 852 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 FOXJ2Q9P0K8 574 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 PCDHGA3Q9Y5H0 932 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 B3GALT1Q9Y5Z6 326 aa11.57□□□□□ -0.56
SSBP3-214ENST00000533209 NPEPPSL1A6NEC2 478 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 E7ENX8 843 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 POC1B-GALNT4F8VUJ3 575 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 TAF4O00268 1085 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 TLX3O43711 291 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 ALDOAP04075 364 aaKnown RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 INHBAP08476 426 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 ENO2P09104 434 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 EBLN1P0CF75 366 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SLC35E2BP0CK96 405 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 CCDC166P0CW27 439 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 GCAP28676 217 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 MSH2P43246 934 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 ARL4DP49703 201 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SERPINB9P50453 376 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 RAB15P59190 212 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 TAP2Q03519 686 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 FOXM1Q08050 763 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SLC29A2Q14542 456 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 ZIC1Q15915 447 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 WDR93Q6P2C0 686 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SUSD1Q6UWL2 747 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SBSNQ6UWP8 590 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 MBOAT1Q6ZNC8 495 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SPATA6LQ8N4H0 392 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 C19orf47Q8N9M1 422 aaKnown RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 OR2A1Q8NGT9 310 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SNIP1Q8TAD8 396 aaKnown RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 UBXN10Q96LJ8 280 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 CCDC138Q96M89 665 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 OR6C1Q96RD1 312 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 CTRCQ99895 268 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 DHRS4Q9BTZ2 278 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 UNKQ9C0B0 810 aaKnown RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SNX15Q9NRS6 342 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 SOHLH2Q9NX45 425 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 STOX2Q9P2F5 926 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 CTNNAL1Q9UBT7 734 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 ZNF180Q9UJW8 692 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 ACSL6Q9UKU0 697 aa11.56□□□□□ -0.56
SSBP3-214ENST00000533209 NOVA2Q9UNW9 492 aaKnown RBP11.56□□□□□ -0.56
SSBP3-214ENST00000533209 EXOC1LA0A1B0GW35 172 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 ZNF839A8K0R7 811 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 POLR1CO15160 346 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-214ENST00000533209 FKBP9O95302 570 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 CD1DP15813 335 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 MAGP20916 626 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 CRABP2P29373 138 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 AP1S2P56377 157 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 DLG1Q12959 904 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 TSNQ15631 228 aaKnown RBP11.55□□□□□ -0.56
SSBP3-214ENST00000533209 SF1Q15637 639 aaKnown RBP11.55□□□□□ -0.56
SSBP3-214ENST00000533209 GPR19Q15760 415 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 ZXDCQ2QGD7 858 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-214ENST00000533209 DCAF12Q5T6F0 453 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 CEACAM20Q6UY09 585 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 CDHR3Q6ZTQ4 885 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 RAPH1Q70E73 1250 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 PROSER1Q86XN7 944 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 SYTL1Q8IYJ3 562 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 PPFIBP2Q8ND30 876 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 OR2L3Q8NG85 312 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 AENQ8WTP8 325 aaKnown RBP11.55□□□□□ -0.56
SSBP3-214ENST00000533209 FGF11Q92914 225 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 ISL2Q96A47 359 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 FBXL8Q96CD0 374 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 TCTN2Q96GX1 697 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 PARD6BQ9BYG5 372 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 ASPSCR1Q9BZE9 553 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 CHRNA10Q9GZZ6 450 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 FAM60AQ9NP50 221 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 PDE7BQ9NP56 450 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 FGF21Q9NSA1 209 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-214ENST00000533209 KLHL20Q9Y2M5 609 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 PCDHB11Q9Y5F2 797 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 IKBKGQ9Y6K9 419 aa11.55□□□□□ -0.56
SSBP3-214ENST00000533209 ANKRD11Q6UB99 2663 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ACACAQ13085 2346 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 ZZEF1O43149 2961 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 KRT38O76015 456 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 C2P06681 752 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 HIST1H2AGP0C0S8 130 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 MSL3P1P0C860 447 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 FGF5P12034 268 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 HIST1H2ADP20671 130 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 RPA3P35244 121 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-214ENST00000533209 SLC26A3P40879 764 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 GRIA3P42263 894 aa11.54□□□□□ -0.56
SSBP3-214ENST00000533209 MAGEA12P43365 314 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms