RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 F8W8V4 182 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 SOCS6O14544 535 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 RASGRF2O14827 1237 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 IPO13O94829 963 aaKnown RBP16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 DDAH2O95865 285 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 S1PR4O95977 384 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 RPN2P04844 631 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 APOA4P06727 396 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 ZSCAN5DPP0CG00 497 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 MMP11P24347 488 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 ITGA3P26006 1051 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 COL8A1P27658 744 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 AOAHP28039 575 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 PSMB5P28074 263 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 BDKRB1P46663 353 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 NKG7Q16617 165 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 SEL1L2Q5TEA6 688 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 FIGLAQ6QHK4 219 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 UNC5DQ6UXZ4 953 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 Q6ZS92 163 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 SHISA6Q6ZSJ9 500 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 OVCH1Q7RTY7 1134 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 ZADH2Q8N4Q0 377 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 PPHLN1Q8NEY8 458 aaKnown RBP16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 TSSK1BQ9BXA7 367 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 CUTCQ9NTM9 273 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 CATSPERZQ9NTU4 200 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 CTSFQ9UBX1 484 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 CDC23Q9UJX2 597 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 ZNF148Q9UQR1 794 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 RUVBL2Q9Y230 463 aaKnown RBP16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 PCDHGA10Q9Y5H3 936 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 HS3ST3B1Q9Y662 390 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 NFS1Q9Y697 457 aa16.38■□□□□ 0.21
RPUSD4-207ENST00000532800 CRYBG3Q68DQ2 2970 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 PRMT5O14744 637 aaPredicted RBP16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 DSCR3O14972 297 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 NRP2O60462 931 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 SLCO2B1O94956 709 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 CLDN1O95832 211 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 LDLRP01130 860 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 APRTP07741 180 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 GLRBP48167 497 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 ARSFP54793 590 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 CRADDP78560 199 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 AIMP2Q13155 320 aaKnown RBP16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 SF1Q15637 639 aaKnown RBP16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 HIF1AQ16665 826 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 CCSMST1Q4G0I0 132 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 SLC13A5Q86YT5 568 aaPredicted RBP16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 TM9SF4Q92544 642 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 SLC22A18Q96BI1 424 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 ZNF285Q96NJ3 590 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 SOX17Q9H6I2 414 aaPredicted RBP16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 CHRAC1Q9NRG0 131 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 INTS7Q9NVH2 962 aaKnown RBP16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 SLC39A10Q9ULF5 831 aa16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 COPG1Q9Y678 874 aaKnown RBP16.37■□□□□ 0.21
RPUSD4-207ENST00000532800 CACNA1DQ01668 2161 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 ANKUB1A6NFN9 424 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 PRICKLE3O43900 615 aaPredicted RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 KLHL41O60662 606 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 CTSVO60911 334 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 MED26O95402 600 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 ONECUT2O95948 504 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 OR1D4P47884 311 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 SESN2P58004 480 aaPredicted RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 GRM7Q14831 915 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 TMED2Q15363 201 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 ZC3H12BQ5HYM0 836 aaKnown RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 AARS2Q5JTZ9 985 aaKnown RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 PRAMEF13Q5VWM6 474 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 ZNF787Q6DD87 383 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 PTRHD1Q6GMV3 140 aaKnown RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 KIRREL2Q6UWL6 708 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 NLRP9Q7RTR0 991 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 PEX13Q92968 403 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 BARD1Q99728 777 aaKnown RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 SELENOSQ9BQE4 189 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 MESP1Q9BRJ9 268 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 FRMD8P1Q9BZ68 369 aaPredicted RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 P2RY12Q9H244 342 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 SLC26A1Q9H2B4 701 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 WDR54Q9H977 334 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 TSR3Q9UJK0 312 aaKnown RBP16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 ANAPC5Q9UJX4 755 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 MAU2Q9Y6X3 613 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 CENPEQ02224 2701 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 ITPR2Q14571 2701 aa16.36■□□□□ 0.21
RPUSD4-207ENST00000532800 CELSR2Q9HCU4 2923 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 WIPF3A6NGB9 483 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 CD3EAPO15446 510 aaKnown RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 C1orf105O95561 183 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 ALBP02768 609 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 RPL22P35268 128 aaKnown RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 PPARGP37231 505 aaPredicted RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 TTPAP49638 278 aa16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 VSX2P58304 361 aaPredicted RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 KCTD19Q17RG1 926 aaPredicted RBP16.35■□□□□ 0.21
RPUSD4-207ENST00000532800 TCTE1Q5JU00 501 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms