RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PIK3CBP42338 1070 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 ITPRIPL2Q3MIP1 535 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 LMX1AQ8TE12 382 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 RGMAQ96B86 450 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 MKKSQ9NPJ1 570 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 MOCS1Q9NZB8 636 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 FETUBQ9UGM5 382 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 AHDC1Q5TGY3 1603 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 C2orf78A6NCI8 922 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 CXorf49A8MYA2 514 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 BCKDKO14874 412 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 PLGP00747 810 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 ALOX5P09917 674 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 CREB1P16220 341 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 NCK1P16333 377 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 SGCBQ16585 318 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 ZNF648Q5T619 568 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 GPRIN1Q7Z2K8 1008 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 OVCA2Q8WZ82 227 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 HAVCR1Q96D42 359 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 GPATCH1Q9BRR8 931 aaKnown RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 RPL26P61254 145 aaKnown RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 FOLH1Q04609 750 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 PDE12Q6L8Q7 609 aaKnown RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 FRRS1Q6ZNA5 592 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 GIPC3Q8TF64 312 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 NARS2Q96I59 477 aaKnown RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 ARHGEF33A8MVX0 844 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 TGFB1P01137 390 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 ALPPP05187 535 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 PSMA1P25786 263 aaKnown RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 CSTF2P33240 577 aaKnown RBP eCLIP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 CCNHP51946 323 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 KLF1Q13351 362 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 THAP5Q7Z6K1 395 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 DCAF4L2Q8NA75 395 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 SGIP1Q9BQI5 828 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 DMTF1Q9Y222 760 aa14.46□□□□□ -0.09
PCDHA9-202ENST00000532602 A0A1W2PQ72 361 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 KDELR3O43731 214 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 NR2C1P13056 603 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 CLCNKAP51800 687 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 RASGEF1BQ0VAM2 473 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 SERINC5Q86VE9 423 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 PXYLP1Q8TE99 480 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 YIPF4Q9BSR8 244 aa14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 ZCCHC3Q9NUD5 404 aaKnown RBP14.46□□□□□ -0.1
PCDHA9-202ENST00000532602 RGS10O43665 173 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 RFPL2O75678 378 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 PRAMEF12O95522 483 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 CBSLP0DN79 551 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 CBSP35520 551 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 CCR10P46092 362 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 HYAL2Q12891 473 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 PCBP2Q15366 365 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 SMU1Q2TAY7 513 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 LRRC70Q7Z2Q7 622 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 POC5Q8NA72 575 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 OR2AJ1Q8NGZ0 328 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 PIWIL1Q96J94 861 aaKnown RBP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 PPM1HQ9ULR3 514 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 A0A1W2PRB8 838 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 PRPS1L1P21108 318 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 IDH3AP50213 366 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 PPP2R2BQ00005 443 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 PITRM1Q5JRX3 1037 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 TPRG1Q6ZUI0 275 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 FAR1Q8WVX9 515 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 LPGAT1Q92604 370 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 COMMD4Q9H0A8 199 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 KCNK6Q9Y257 313 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 SQORQ9Y6N5 450 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 GNB5O14775 395 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 FADS2O95864 444 aaKnown RBP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 ADH1BP00325 375 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 NCBP2P52298 156 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 SIM2Q14190 667 aaPredicted RBP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 SLBPQ14493 270 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 BICRALQ6AI39 1079 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 SLC9B2Q86UD5 537 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 SVOPLQ8N434 492 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 ZNF433Q8N7K0 673 aaPredicted RBP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 FAM47BQ8NA70 645 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 OR5T3Q8NGG3 340 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 CMTM7Q96FZ5 175 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 CDKN2AIPNLQ96HQ2 116 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 ZNF347Q96SE7 839 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 IL23AQ9NPF7 189 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 CA14Q9ULX7 337 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 H0YGN5 161 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 SERPINA3P01011 423 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 EIF2B2P49770 351 aaKnown RBP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 LPCAT4Q643R3 524 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 FATE1Q969F0 183 aa14.45□□□□□ -0.1
PCDHA9-202ENST00000532602 RGS17Q9UGC6 210 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms