RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CCDC36Q8IYA8 594 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 PGBD3Q8N328 593 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 KREMEN2Q8NCW0 462 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 LPCAT1Q8NF37 534 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 OR8K5Q8NH50 307 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 TEX47Q8TBZ9 253 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 LINC01599Q8WXQ3 324 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 RPRD1AQ96P16 312 aaPredicted RBP6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 PPP1R2P1Q96PQ5 205 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 DPCDQ9BVM2 203 aaPredicted RBP6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 CIPCQ9C0C6 399 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 ST6GALNAC4Q9H4F1 302 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 REEP1Q9H902 201 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 ACTR8Q9H981 624 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 ACSL5Q9ULC5 683 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 STAP1Q9ULZ2 295 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 SNX6Q9UNH7 406 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 MFHAS1Q9Y4C4 1052 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 SNX10Q9Y5X0 201 aa6.65□□□□□ -1.34
TGFBR3-209ENST00000532540 SIPA1L1O43166 1804 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC1A7O00341 560 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 APOC3P02656 99 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 PGDP52209 483 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 BCAT1P54687 386 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 CSNK2BP67870 215 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 SMARCB1Q12824 385 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 FAPQ12884 760 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 TARDBPQ13148 414 aaKnown RBP eCLIP6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 ELOAQ14241 798 aaKnown RBP6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 FGFBP1Q14512 234 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 ZMYND11Q15326 602 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 SETMARQ53H47 684 aaPredicted RBP6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 TXNDC8Q6A555 127 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 GRASPQ7Z6J2 395 aaPredicted RBP6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 CUZD1Q86UP6 607 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 CFAP52Q8N1V2 620 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 CPSF7Q8N684 471 aaKnown RBP6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 HTR3CQ8WXA8 447 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC47A1Q96FL8 570 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 REXO5Q96IC2 774 aaKnown RBP6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 IGSF21Q96ID5 467 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 ARL5BQ96KC2 179 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 TOX2Q96NM4 488 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 RNF157Q96PX1 679 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 DOK1Q99704 481 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 PTPRHQ9HD43 1115 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 FBXO8Q9NRD0 319 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 GSTK1Q9Y2Q3 226 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 BDP1A6H8Y1 2624 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 TRIP12Q14669 1992 aaPredicted RBP6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 LAMB1P07942 1786 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 DLEC1Q9Y238 1755 aa6.65□□□□□ -1.35
TGFBR3-209ENST00000532540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 UBA6A0AVT1 1052 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 HMGN1P05114 100 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 UNGP13051 313 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TPSB2P20231 275 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 CRHBPP24387 322 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PSMA1P25786 263 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 NPY2RP49146 381 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 CENPAP49450 140 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 GSK3BP49841 420 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 LIMK2P53671 638 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 GPLD1P80108 840 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 GALK2Q01415 458 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TPSAB1Q15661 275 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TCTN1Q2MV58 587 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 C1orf220Q5T0J3 134 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 CES5AQ6NT32 575 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ANGPTL8Q6UXH0 198 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 NRARPQ7Z6K4 114 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SPAG16Q8N0X2 631 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 VWA5B2Q8N398 1253 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 LINC00469Q8N7U9 141 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ARL14EPQ8N8R7 260 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 BLOC1S5Q8TDH9 187 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TCEAL3Q969E4 200 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RNFT2Q96EX2 444 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SMARCD1Q96GM5 515 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 MRPL57Q9BQC6 102 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 APOL2Q9BQE5 337 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 C20orf27Q9GZN8 174 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PLSCR3Q9NRY6 295 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 OXSMQ9NWU1 459 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ERVK-18Q9QC07 812 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ZDHHC2Q9UIJ5 367 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SZT2Q5T011 3432 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PRUNE2Q8WUY3 3088 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SUPT3HB4E1H0 165 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 C9JVG2 144 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 BEST1O76090 585 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PRAMEF1O95521 474 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ECDO95905 644 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 MT-ND2P03891 347 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RAB3AP20336 220 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 POU1F1P28069 291 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RPL9P32969 192 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PPM1AP35813 382 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RPS5P46782 204 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms