RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 OTOAQ7RTW8 1153 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 GALNT16Q8N428 558 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 MAIP1Q8WWC4 291 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 RAD51AP1Q96B01 352 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 MRM3Q9HC36 420 aaKnown RBP16.15■□□□□ 0.18
CPSF1-207ENST00000531727 ENAMQ9NRM1 1142 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 NFS1Q9Y697 457 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 MAST4O15021 2626 aa16.15■□□□□ 0.18
CPSF1-207ENST00000531727 SHANK1Q9Y566 2161 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 TARM1B6A8C7 271 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 DSCR3O14972 297 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 KLHL41O60662 606 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 ONECUT2O95948 504 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 FGGP02679 453 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 ALPPP05187 535 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 PIM1P11309 404 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-207ENST00000531727 ITGAXP20702 1163 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 GRIA3P42263 894 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 BDKRB1P46663 353 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 EIF3BP55884 814 aaKnown RBP16.14■□□□□ 0.17
CPSF1-207ENST00000531727 CDK16Q00536 496 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 CYP2A13Q16696 494 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 TCTE1Q5JU00 501 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 YOD1Q5VVQ6 348 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-207ENST00000531727 ZNF662Q6ZS27 426 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 TMEM151BQ8IW70 566 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 RAB42Q8N4Z0 105 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 OTUD6BQ8N6M0 293 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 SKA2Q8WVK7 121 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-207ENST00000531727 ZUFSPQ96AP4 578 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 ZNF285Q96NJ3 590 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 KIFC1Q9BW19 673 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 WDR54Q9H977 334 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 SYBUQ9NX95 663 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 TTC7AQ9ULT0 858 aaPredicted RBP16.14■□□□□ 0.17
CPSF1-207ENST00000531727 SEC16AO15027 2179 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 PCM1Q15154 2024 aa16.14■□□□□ 0.17
CPSF1-207ENST00000531727 AGPSO00116 658 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 IPO13O94829 963 aaKnown RBP16.13■□□□□ 0.17
CPSF1-207ENST00000531727 AGFG2O95081 481 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 VAPBO95292 243 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 ALBP02768 609 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 TPSB2P20231 275 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 MGAT1P26572 445 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 ARNTP27540 789 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 KCNJ1P48048 391 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 SOX8P57073 446 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 GRM7Q14831 915 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 TPSAB1Q15661 275 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 CCSMST1Q4G0I0 132 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 CTSL3PQ5NE16 218 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 MRNIPQ6NTE8 343 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 LRRC8BQ6P9F7 803 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 IGFL3Q6UXB1 125 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 OVCH1Q7RTY7 1134 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 HMGCLL1Q8TB92 370 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 NACC2Q96BF6 587 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 MFSD3Q96ES6 412 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 FOPNLQ96NB1 174 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 BIRC8Q96P09 236 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 SLC29A3Q9BZD2 475 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 ZNF552Q9H707 407 aaPredicted RBP16.13■□□□□ 0.17
CPSF1-207ENST00000531727 LRRC4CQ9HCJ2 640 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 ATP13A2Q9NQ11 1180 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 LZTFL1Q9NQ48 299 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 CUTCQ9NTM9 273 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 RUVBL2Q9Y230 463 aaKnown RBP16.13■□□□□ 0.17
CPSF1-207ENST00000531727 KLK4Q9Y5K2 254 aa16.13■□□□□ 0.17
CPSF1-207ENST00000531727 LRRK2Q5S007 2527 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 FITM1A5D6W6 292 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 CCDC175P0C221 793 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 MMP11P24347 488 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 MCM3P25205 808 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 PSMB5P28074 263 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 FMO4P31512 558 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 CCNFP41002 786 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 NKG7Q16617 165 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 TYSND1Q2T9J0 566 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 PLEKHN1Q494U1 663 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-207ENST00000531727 RNF187Q5TA31 235 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-207ENST00000531727 CNSTQ6PJW8 725 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 CES3Q6UWW8 571 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 SDCCAG8Q86SQ7 713 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-207ENST00000531727 TTC29Q8NA56 475 aaPredicted RBP16.12■□□□□ 0.17
CPSF1-207ENST00000531727 MAGEC3Q8TD91 643 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 LPGAT1Q92604 370 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 TCF12Q99081 682 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 MIPEPQ99797 713 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 SELENOSQ9BQE4 189 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 SLC26A1Q9H2B4 701 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 HOMER3Q9NSC5 361 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 MAP10Q9P2G4 905 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 SOX13Q9UN79 622 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 B3GNT3Q9Y2A9 372 aa16.12■□□□□ 0.17
CPSF1-207ENST00000531727 A0A1W2PPV9 198 aa16.11■□□□□ 0.17
CPSF1-207ENST00000531727 TCRBV7S3A2A0A539 114 aa16.11■□□□□ 0.17
CPSF1-207ENST00000531727 KRT87PA6NCN2 255 aa16.11■□□□□ 0.17
CPSF1-207ENST00000531727 TCP11X1B4DZS4 312 aa16.11■□□□□ 0.17
CPSF1-207ENST00000531727 GOLGA8KD6RF30 607 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms