RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ZIC1Q15915 447 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 PWWP2BQ6NUJ5 590 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 TMEM207Q6UWW9 146 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 CDHR3Q6ZTQ4 885 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 CEP128Q6ZU80 1094 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 UBE2R2Q712K3 238 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 TAX1BP1Q86VP1 789 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 RELL1Q8IUW5 271 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 FAM20CQ8IXL6 584 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 CACNA2D3Q8IZS8 1091 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 NLGN4XQ8N0W4 816 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 MYO1HQ8N1T3 1032 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 C19orf47Q8N9M1 422 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 NLGN4YQ8NFZ3 816 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 DLG3Q92796 817 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 LINGO1Q96FE5 620 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 CCNL2Q96S94 520 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 CPNE1Q99829 537 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 SLC12A9Q9BXP2 914 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 ULBP3Q9BZM4 244 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 TSPYL1Q9H0U9 437 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 FAM60AQ9NP50 221 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 CFAP47Q6ZTR5 3102 aa12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 SNRNP200O75643 2136 aaKnown RBP12.22□□□□□ -0.45
CCDC90B-216ENST00000529856 SLC16A5O15375 505 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 KIAA0754O94854 1291 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 FKBP9O95302 570 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 TIAF1O95411 115 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 SLC16A8O95907 504 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 SAT1P21673 171 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 ECHS1P30084 290 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 STX2P32856 288 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 GP5P40197 560 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 GABRA4P48169 554 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 PNLIPRP1P54315 467 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 TAS2R39P59534 338 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 SRSF6Q13247 344 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 KBTBD12Q3ZCT8 623 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 MANEAQ5SRI9 462 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 FIGLAQ6QHK4 219 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 C6orf15Q6UXA7 325 aaPredicted RBP12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 DNAJC22Q8N4W6 341 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 IL22RA1Q8N6P7 574 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 OR2A1Q8NGT9 310 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 MCOLN3Q8TDD5 553 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 FBF1Q8TES7 1133 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 ZNF480Q8WV37 535 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 SMPDL3AQ92484 453 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 PDLIM5Q96HC4 596 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 CRELD1Q96HD1 420 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 VPS39Q96JC1 886 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 PRORYQ9H606 182 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 FANCEQ9HB96 536 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 PARVBQ9HBI1 364 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 TXNDC16Q9P2K2 825 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 SERTAD3Q9UJW9 196 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 ADAMTS6Q9UKP5 1117 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 PDE10AQ9Y233 779 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 KLHL20Q9Y2M5 609 aa12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 MTO1Q9Y2Z2 717 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-216ENST00000529856 TEX51A0A1B0GUA7 166 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 ZNF839A8K0R7 811 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 TARM1B6A8C7 271 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 TMEM150CB9EJG8 249 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 HCRTR1O43613 425 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 SYF2O95926 243 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 CYP2A7P20853 494 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 MAGP20916 626 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 PSMB5P28074 263 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 POU4F1Q01851 419 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 VAC14Q08AM6 782 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 ABHD18Q0P651 414 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 SP140Q13342 867 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 NAB1Q13506 487 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 GRTP1Q5TC63 336 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 KIAA1614Q5VZ46 1190 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 FCRL6Q6DN72 434 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 VASH2Q86V25 355 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 CEP97Q8IW35 865 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 CTAGE3PQ8IX95 158 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 NKAPQ8N5F7 415 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 ESX1Q8N693 406 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 PPM1NQ8N819 430 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 OR2L3Q8NG85 312 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 OR1L3Q8NH93 324 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 SNRNP27Q8WVK2 155 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 ZUFSPQ96AP4 578 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 RNF31Q96EP0 1072 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 CCDC138Q96M89 665 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 FMO2Q99518 471 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 RBBP8Q99708 897 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 MIPEPQ99797 713 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 L2HGDHQ9H9P8 463 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 POPDC3Q9HBV1 291 aa12.2□□□□□ -0.46
CCDC90B-216ENST00000529856 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms