RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SPATA6LQ8N4H0 392 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 FRMD1Q8N878 549 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 OR14A16Q8NHC5 309 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 LNX1Q8TBB1 728 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 WFIKKN2Q8TEU8 576 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 ZNF707Q96C28 371 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 ARHGEF26Q96DR7 871 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 MED30Q96HR3 178 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 METTL2AQ96IZ6 378 aaKnown RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 TMEM68Q96MH6 324 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 ZNF570Q96NI8 536 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 WDFY2Q96P53 400 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 GAD1Q99259 594 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 SEPT5Q99719 369 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 LLPHQ9BRT6 129 aaKnown RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 TRIM6Q9C030 488 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-212ENST00000529046 MFSD1Q9H3U5 465 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 KIF9Q9HAQ2 790 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 C17orf75Q9HAS0 396 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 HCFC1R1Q9NWW0 138 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 MIOSQ9NXC5 875 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 LYVE1Q9Y5Y7 322 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 CLUHO75153 1309 aa4.67□□□□□ -1.66
CSDE1-212ENST00000529046 SF3B1O75533 1304 aaKnown RBP eCLIP4.67□□□□□ -1.661e-6■■■■■ 28.6
CSDE1-212ENST00000529046 EME2A4GXA9 379 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 PRR23AA6NEV1 266 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 SRRM3A6NNA2 597 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 EIF3CLB5ME19 914 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 PRSS44E7EML9 344 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 LAD1O00515 517 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 PTGESO14684 152 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 TRAPPC3O43617 180 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 NDUFS7O75251 213 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 RNASEH2AO75792 299 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 IPO7O95373 1038 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ZNF182P17025 639 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 U2AF2P26368 475 aaKnown RBP eCLIP4.66□□□□□ -1.662e-12■■■■□ 24.2
CSDE1-212ENST00000529046 C21orf33P30042 268 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 RPL3P39023 403 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 MAGEA9P43362 315 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 FASLGP48023 281 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 PCYT1AP49585 367 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 BRWD1-AS2P59051 145 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 SEC61A1P61619 476 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 KIF5AQ12840 1032 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 MAMLD1Q13495 774 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 NAE1Q13564 534 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 TRIM29Q14134 588 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 NFATC4Q14934 902 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ADIPOQQ15848 244 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ZNF528Q3MIS6 628 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 DCAF4L1Q3SXM0 396 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 CDONQ4KMG0 1287 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 JADE1Q6IE81 842 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 TTI2Q6NXR4 508 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 DCLRE1AQ6PJP8 1040 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ALKAL1Q6UXT8 129 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 B3GNT6Q6ZMB0 384 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 C4orf50Q6ZRC1 276 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 C18orf65Q6ZTR6 163 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ASCL5Q7RTU5 278 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ZBTB8OSQ8IWT0 167 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 RBMXL3Q8N7X1 1067 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ZNF114Q8NC26 417 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ERMNQ8TAM6 284 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 KIFAP3Q92845 792 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 SMARCE1Q969G3 411 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 IGSF8Q969P0 613 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 TSPAN18Q96SJ8 248 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ADPGKQ9BRR6 497 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 CD93Q9NPY3 652 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 HINT3Q9NQE9 182 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 CNOT8Q9UFF9 292 aaKnown RBP4.66□□□□□ -1.66
CSDE1-212ENST00000529046 TINAGQ9UJW2 476 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 FBXW11Q9UKB1 542 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 CDC14AQ9UNH5 594 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ERVK-11Q9UQG0 969 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 HES2Q9Y543 173 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 ZDBF2Q9HCK1 2354 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 DENND4AQ7Z401 1863 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 CFAP54Q96N23 3096 aa4.66□□□□□ -1.66
CSDE1-212ENST00000529046 CACNA1HO95180 2353 aa4.65□□□□□ -1.66
CSDE1-212ENST00000529046 FAM237BA0A1B0GVD1 139 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 ARHGEF37A1IGU5 675 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 CDRT15L2A8MXV6 281 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 B4GALT5O43286 388 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 PLRG1O43660 514 aaKnown RBP4.65□□□□□ -1.67
CSDE1-212ENST00000529046 PI15O43692 258 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 ZIC3O60481 467 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 KCNJ13O60928 360 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 MED24O75448 989 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 TADA2AO75478 443 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 DAB1O75553 588 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 ACAA1P09110 424 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-212ENST00000529046 CA8P35219 290 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 PRPHP41219 470 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 CASP2P42575 452 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 F2RL1P55085 397 aa4.65□□□□□ -1.67
CSDE1-212ENST00000529046 HMGN5P82970 282 aaKnown RBP4.65□□□□□ -1.67
CSDE1-212ENST00000529046 ZBED6P86452 979 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms