RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CTNNBL1Q8WYA6 563 aaPredicted RBP18.11■□□□□ 0.49
SSRP1-204ENST00000529002 SYN2Q92777 582 aaPredicted RBP18.11■□□□□ 0.49
SSRP1-204ENST00000529002 DNAJC1Q96KC8 554 aaKnown RBP18.11■□□□□ 0.49
SSRP1-204ENST00000529002 IL17FQ96PD4 163 aa18.11■□□□□ 0.49
SSRP1-204ENST00000529002 NRP2O60462 931 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 UQCRHP07919 91 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 ITGAMP11215 1152 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 CDKN2BP42772 138 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 SMSP52788 366 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 CSE1LP55060 971 aaKnown RBP18.1■□□□□ 0.49
SSRP1-204ENST00000529002 VSX2P58304 361 aaPredicted RBP18.1■□□□□ 0.49
SSRP1-204ENST00000529002 CSNK1G2P78368 415 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 RBPJQ06330 500 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 TYRO3Q06418 890 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 GRM7Q14831 915 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 KIR2DS3Q14952 304 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.1■□□□□ 0.49
SSRP1-204ENST00000529002 HIBCHQ6NVY1 386 aaPredicted RBP18.1■□□□□ 0.49
SSRP1-204ENST00000529002 FIGLAQ6QHK4 219 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 NDUFAF7Q7L592 441 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 PIANPQ8IYJ0 282 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 OR5K2Q8NHB8 316 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 DNAJB8Q8NHS0 232 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 HEXDCQ8WVB3 486 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 ELMO1Q92556 727 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 MIEF2Q96C03 454 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 VPS50Q96JG6 964 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 VPS37BQ9H9H4 285 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 POLG2Q9UHN1 485 aa18.1■□□□□ 0.49
SSRP1-204ENST00000529002 MRPS2Q9Y399 296 aaKnown RBP18.1■□□□□ 0.49
SSRP1-204ENST00000529002 ZNF469Q96JG9 3925 aaPredicted RBP18.09■□□□□ 0.49
SSRP1-204ENST00000529002 TRBV5-4A0A0C4DH59 114 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 AGAP20933 346 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 PKLRP30613 574 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 NR2C2P49116 596 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 ART1P52961 327 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 GEMP55040 296 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 CASP6P55212 293 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 SPARCL1Q14515 664 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 DBN1Q16643 649 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 CNSTQ6PJW8 725 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 MEX3BQ6ZN04 569 aaKnown RBP18.09■□□□□ 0.49
SSRP1-204ENST00000529002 TTC29Q8NA56 475 aaPredicted RBP18.09■□□□□ 0.49
SSRP1-204ENST00000529002 SLC35G2Q8TBE7 412 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 SPOCK3Q9BQ16 436 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 SELENOSQ9BQE4 189 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 TMEM121Q9BTD3 319 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 ZNF304Q9HCX3 659 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 SMARCAL1Q9NZC9 954 aa18.09■□□□□ 0.49
SSRP1-204ENST00000529002 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.09■□□□□ 0.49
SSRP1-204ENST00000529002 NIPBLQ6KC79 2804 aaeCLIP18.08■□□□□ 0.48
SSRP1-204ENST00000529002 FAM227AF5H4B4 570 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 LIN7AO14910 233 aaPredicted RBP18.08■□□□□ 0.48
SSRP1-204ENST00000529002 CTSVO60911 334 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 WFS1O76024 890 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 AP2A1O95782 977 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 SERPINA7P05543 415 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 CARSP49589 748 aaKnown RBP18.08■□□□□ 0.48
SSRP1-204ENST00000529002 OCA2Q04671 838 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 WASHC2DQ5SRD0 308 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 FRMPD2BQ6IN97 320 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 DENND1AQ8TEH3 1009 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 ZNF285Q96NJ3 590 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 QKIQ96PU8 341 aaKnown RBP eCLIP18.08■□□□□ 0.48
SSRP1-204ENST00000529002 MENTQ9BUN1 341 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 ENKD1Q9H0I2 346 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 GBA3Q9H227 469 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 IMPACTQ9P2X3 320 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 MEMO1Q9Y316 297 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 HEATR5BQ9P2D3 2071 aa18.08■□□□□ 0.48
SSRP1-204ENST00000529002 ABCA2Q9BZC7 2435 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 LOC105369274A0A096LPK9 316 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 LOC102723532A0A0G2JNH3 316 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 A0A1B0GTL3 188 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 SLC5A10A0PJK1 596 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 HYKKA2RU49 373 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 PRAMEF2O60811 474 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 BMP10O95393 424 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 CRTAMO95727 393 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 PSMB4P28070 264 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 RBL1P28749 1068 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 ZBED6P86452 979 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 GPR33Q49SQ1 333 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 ODF2Q5BJF6 829 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 DENND5AQ6IQ26 1287 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 C3P1Q6ZMU1 363 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 BZW1Q7L1Q6 419 aaKnown RBP18.07■□□□□ 0.48
SSRP1-204ENST00000529002 CCDC50Q8IVM0 306 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 OR4N4Q8N0Y3 316 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 NRGNQ92686 78 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 VAT1Q99536 393 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 HES7Q9BYE0 225 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 ZNF282Q9UDV7 671 aaPredicted RBP18.07■□□□□ 0.48
SSRP1-204ENST00000529002 ZC3H7BQ9UGR2 993 aaKnown RBP18.07■□□□□ 0.48
SSRP1-204ENST00000529002 ZNF835Q9Y2P0 537 aa18.07■□□□□ 0.48
SSRP1-204ENST00000529002 ABCA4P78363 2273 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 DNHD1Q96M86 4753 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 IGHV1-45A0A0A0MS14 117 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 FITM1A5D6W6 292 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 OR5H15A6NDH6 313 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms