RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 ZNF160Q9HCG1 818 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 SPTLC3Q9NUV7 552 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 PLAGL1Q9UM63 463 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 MRPS2Q9Y399 296 aaKnown RBP11.08□□□□□ -0.64
CMTM1-211ENST00000528484 DCHS2Q6V1P9 2916 aa11.08□□□□□ -0.64
CMTM1-211ENST00000528484 NSG1A0A0A6YYJ2 146 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 CCL21O00585 134 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 FKBP9O95302 570 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 GAS8O95995 478 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 CTSBP07858 339 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 ERVK-10P10266 1014 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 ACADLP28330 430 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 HTR1EP28566 365 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 PPARGP37231 505 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 CDKN1CP49918 316 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 KCNK10P57789 538 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 EIF3EP60228 445 aaKnown RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 COPS2P61201 443 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 OLIG2Q13516 323 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 SF1Q15637 639 aaKnown RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 DBN1Q16643 649 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 ZNF658BQ4V348 819 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 BBS12Q6ZW61 710 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 MRGPRGQ86SM5 289 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 OR11G2Q8NGC1 345 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 MIEF2Q96C03 454 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 LURAP1Q96LR2 239 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 SPATA13Q96N96 652 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 RAB11FIP5Q9BXF6 653 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 ARNT2Q9HBZ2 717 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 SLC22A11Q9NSA0 550 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 NLE1Q9NVX2 485 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 CTSFQ9UBX1 484 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 ZNF282Q9UDV7 671 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-211ENST00000528484 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 ALG6Q9Y672 507 aa11.07□□□□□ -0.64
CMTM1-211ENST00000528484 PCDH17O14917 1159 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 PRPF4O43172 522 aaKnown RBP eCLIP11.06□□□□□ -0.64
CMTM1-211ENST00000528484 WFS1O76024 890 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 MLYCDO95822 493 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ONECUT2O95948 504 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 RBP3P10745 1247 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
CMTM1-211ENST00000528484 CD9P21926 228 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 MSNP26038 577 aaKnown RBP11.06□□□□□ -0.64
CMTM1-211ENST00000528484 PKLRP30613 574 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 OR1D4P47884 311 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 TNFSF10P50591 281 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 POU6F1Q14863 301 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 TCEAL1Q15170 157 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 LONRF1Q17RB8 773 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 PRMT9Q6P2P2 845 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 CNSTQ6PJW8 725 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 FIGLAQ6QHK4 219 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 PACS1Q6VY07 963 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ARHGEF18Q6ZSZ5 1173 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 DCUN1D3Q8IWE4 304 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 METTL27Q8N6F8 245 aaPredicted RBP11.06□□□□□ -0.64
CMTM1-211ENST00000528484 CATSPER1Q8NEC5 780 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 DNAJB8Q8NHS0 232 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 FLVCR1-AS1Q8TAF5 88 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ASZ1Q8WWH4 475 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ITLN2Q8WWU7 325 aaPredicted RBP11.06□□□□□ -0.64
CMTM1-211ENST00000528484 CDKN2AIPNLQ96HQ2 116 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 TRIM56Q9BRZ2 755 aaKnown RBP11.06□□□□□ -0.64
CMTM1-211ENST00000528484 LRRC40Q9H9A6 602 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ZNF304Q9HCX3 659 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ABHD10Q9NUJ1 306 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 PTGFRNQ9P2B2 879 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 IMPACTQ9P2X3 320 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 SEC14L3Q9UDX4 400 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 TEKT2Q9UIF3 430 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 C3orf18Q9UK00 162 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 ITGB1BP2Q9UKP3 347 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 MRFAP1Q9Y605 127 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 SNRNP200O75643 2136 aaKnown RBP11.06□□□□□ -0.64
CMTM1-211ENST00000528484 PDZD2O15018 2839 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 PKDREJQ9NTG1 2253 aa11.06□□□□□ -0.64
CMTM1-211ENST00000528484 SLC5A10A0PJK1 596 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 SRPX2O60687 465 aaPredicted RBP11.05□□□□□ -0.64
CMTM1-211ENST00000528484 UNC5CO95185 931 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 RASAL1O95294 804 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 SNRPB2P08579 225 aaKnown RBP11.05□□□□□ -0.64
CMTM1-211ENST00000528484 ZGLP1P0C6A0 271 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 PRSS56P0CW18 603 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 FBLP22087 321 aaKnown RBP11.05□□□□□ -0.64
CMTM1-211ENST00000528484 PEBP1P30086 187 aaKnown RBP11.05□□□□□ -0.64
CMTM1-211ENST00000528484 SMSP52788 366 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 CSE1LP55060 971 aaKnown RBP11.05□□□□□ -0.64
CMTM1-211ENST00000528484 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
CMTM1-211ENST00000528484 KLC1Q07866 573 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 HSPA14Q0VDF9 509 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 SPARCL1Q14515 664 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 NAA25Q14CX7 972 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 TMED2Q15363 201 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 ZNF630Q2M218 657 aaPredicted RBP11.05□□□□□ -0.64
CMTM1-211ENST00000528484 XKRXQ6PP77 449 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 COX15Q7KZN9 410 aa11.05□□□□□ -0.64
CMTM1-211ENST00000528484 NDUFAF7Q7L592 441 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms