RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PTPN4P29074 926 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 ELK3P41970 407 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 BDKRB1P46663 353 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 MPP1Q00013 466 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 HIF1AQ16665 826 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 CCSMST1Q4G0I0 132 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 ZC3H12BQ5HYM0 836 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 PRAMEF17Q5VTA0 474 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 STEAP4Q687X5 459 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 LRRC8EQ6NSJ5 796 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 C16orf46Q6P387 395 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 FAM199XQ6PEV8 388 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 FIGLAQ6QHK4 219 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 CYHR1Q6ZMK1 362 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 SYVN1Q86TM6 617 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 IGDCC3Q8IVU1 814 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 SPATA4Q8NEY3 305 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 DENND1AQ8TEH3 1009 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 MR1Q95460 341 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 FAM136AQ96C01 138 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 RNF31Q96EP0 1072 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 CERS2Q96G23 380 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 GPR21Q99679 349 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 TRIM51Q9BSJ1 452 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 SEMA4CQ9C0C4 833 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 SLC7A5P2Q9GIP4 190 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 ENAMQ9NRM1 1142 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 PCMTD2Q9NV79 361 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 ZC3H7BQ9UGR2 993 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 TUBD1Q9UJT1 453 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 RUVBL2Q9Y230 463 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 FARSAQ9Y285 508 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 MRPS18BQ9Y676 258 aaKnown RBP11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 HEATR5BQ9P2D3 2071 aa11.66□□□□□ -0.54
TRAPPC4-209ENST00000528230 A0A1W2PPV9 198 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 ZNF839A8K0R7 811 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 ARHGEF33A8MVX0 844 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 E7ESA3 106 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 GFYI3L273 518 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 ZBTB14O43829 449 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 BANF1O75531 89 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 AHSGP02765 367 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 PRKAR1AP10644 381 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 AGXTP21549 392 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 GABRB3P28472 473 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 CARSP49589 748 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 ERV3-1Q14264 604 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 NAA25Q14CX7 972 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 TEDDM1Q5T9Z0 273 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 RHBDD2Q6NTF9 364 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 MCATQ8IVS2 390 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 C2orf73Q8N5S3 287 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 OR2A1Q8NGT9 310 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 GIMAP7Q8NHV1 300 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 PROKR1Q8TCW9 393 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 CD200R1Q8TD46 325 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 APOBEC4Q8WW27 367 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 ASB11Q8WXH4 323 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 SMPDL3AQ92484 453 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 SLC30A3Q99726 388 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 C17orf62Q9BQA9 187 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 ERP44Q9BS26 406 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 NLNQ9BYT8 704 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 TRIM31Q9BZY9 425 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 SPRTNQ9H040 489 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 CHST8Q9H2A9 424 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 ACTL8Q9H568 366 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 EURLQ9NYK6 297 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 TAS2R13Q9NYV9 303 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 WHRNQ9P202 907 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 CIDEBQ9UHD4 219 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 CORO1CQ9ULV4 474 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 SRPK3Q9UPE1 567 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 POLHQ9Y253 713 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 SNX24Q9Y343 169 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 CCDC88CQ9P219 2028 aa11.65□□□□□ -0.54
TRAPPC4-209ENST00000528230 FER1L5A0AVI2 2057 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 ANKRD12Q6UB98 2062 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 B8ZZF3 427 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZSCAN9O15535 394 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 HCRTR1O43613 425 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 SRPX2O60687 465 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 CD63P08962 238 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 FAM87AP0C7U9 286 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 GRIA3P42263 894 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 RPL21P46778 160 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 RGS4P49798 205 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 ARSFP54793 590 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 POLE2P56282 527 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 CUL1Q13616 776 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 UGT8Q16880 541 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 DEFB109BQ30KR1 87 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 TCTE1Q5JU00 501 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 YOD1Q5VVQ6 348 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZNF385CQ66K41 422 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 FCRL6Q6DN72 434 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 SYT10Q6XYQ8 523 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 TAX1BP1Q86VP1 789 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 FAM20CQ8IXL6 584 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms