RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CBSP35520 551 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 KCNJ1P48048 391 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 GRB7Q14451 532 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 SF1Q15637 639 aaKnown RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 TYSND1Q2T9J0 566 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 NKAIN1Q4KMZ8 207 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 COLEC12Q5KU26 742 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 KIAA0930Q6ICG6 404 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 LDB1Q86U70 411 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 MCATQ8IVS2 390 aaKnown RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 ZNF655Q8N720 491 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 EFCAB3Q8N7B9 438 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 OR2Y1Q8NGV0 311 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 LKAAEAR1Q8TD35 194 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 PTERQ96BW5 349 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 OSBPL9Q96SU4 736 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 TTC7AQ9ULT0 858 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-212ENST00000527887 KLK4Q9Y5K2 254 aa13.65□□□□□ -0.22
CAPN1-212ENST00000527887 TTLL8A6PVC2 850 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 EFCAB8A8MWE9 144 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 C1orf105O95561 183 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 MLNP12872 115 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 OGNP20774 298 aaKnown RBP13.64□□□□□ -0.23
CAPN1-212ENST00000527887 MGAT1P26572 445 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 FOLR3P41439 243 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 PAFAH1B1P43034 410 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 CRADDP78560 199 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 CHAF1BQ13112 559 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 DEFB110Q30KQ9 67 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 FAM214AQ32MH5 1076 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 MRPL14Q6P1L8 145 aaKnown RBP13.64□□□□□ -0.23
CAPN1-212ENST00000527887 FIGLAQ6QHK4 219 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 PRELID2Q8N945 189 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 LMNTD1Q8N9Z9 388 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 FDCSPQ8NFU4 85 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 FKBP10Q96AY3 582 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 MFSD3Q96ES6 412 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 ZNF285Q96NJ3 590 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 SMAD5Q99717 465 aaKnown RBP13.64□□□□□ -0.23
CAPN1-212ENST00000527887 GPR83Q9NYM4 423 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 SPATA7Q9P0W8 599 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 KLHL42Q9P2K6 505 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 NBASA2RRP1 2371 aa13.64□□□□□ -0.23
CAPN1-212ENST00000527887 RELNP78509 3460 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 A0A1B0GX78 115 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 CLEC18AA5D8T8 446 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 ZNF185O15231 689 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 HCRTR1O43613 425 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 PRICKLE3O43900 615 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-212ENST00000527887 VPS4BO75351 444 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 IPO13O94829 963 aaKnown RBP13.63□□□□□ -0.23
CAPN1-212ENST00000527887 MATN4O95460 622 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 ARNTP27540 789 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 OTX2P32243 289 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 HSD17B2P37059 387 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 GCGRP47871 477 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 MLLT10P55197 1068 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 EIF3BP55884 814 aaKnown RBP13.63□□□□□ -0.23
CAPN1-212ENST00000527887 SOX8P57073 446 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 ATP1A4Q13733 1029 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 KCNJ11Q14654 390 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 GRM7Q14831 915 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 VWA5B1Q5TIE3 1220 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 C1orf189Q5VU69 101 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 CLEC18BQ6UXF7 455 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 OVCH1Q7RTY7 1134 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 MRGPREQ86SM8 312 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 CREG2Q8IUH2 290 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 FAM26EQ8N5C1 309 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 OTUD6BQ8N6M0 293 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 CLEC1AQ8NC01 280 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 CLEC18CQ8NCF0 446 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 GALNT11Q8NCW6 608 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 MCUQ8NE86 351 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 ACTRT1Q8TDG2 376 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 SKA2Q8WVK7 121 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-212ENST00000527887 LPGAT1Q92604 370 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 BIRC8Q96P09 236 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 INTS10Q9NVR2 710 aaKnown RBP13.63□□□□□ -0.23
CAPN1-212ENST00000527887 SYBUQ9NX95 663 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 SAMD15Q9P1V8 674 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 DHCR7Q9UBM7 475 aaKnown RBP13.63□□□□□ -0.23
CAPN1-212ENST00000527887 VPS4AQ9UN37 437 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 PLAAQ9Y263 795 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 PTRH2Q9Y3E5 179 aaKnown RBP13.63□□□□□ -0.23
CAPN1-212ENST00000527887 SEC16AO15027 2179 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 MAST4O15021 2626 aa13.63□□□□□ -0.23
CAPN1-212ENST00000527887 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 SPENQ96T58 3664 aaKnown RBP13.62□□□□□ -0.23
CAPN1-212ENST00000527887 PTPN13Q12923 2485 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 FAM237BA0A1B0GVD1 139 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 CTAGE15A4D2H0 777 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 FITM1A5D6W6 292 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 SDR42E2A6NKP2 422 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 PHF2O75151 1096 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 ALPPP05187 535 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 TUBBP07437 444 aa13.62□□□□□ -0.23
CAPN1-212ENST00000527887 CTAGE8P0CG41 777 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms