RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PRR5P85299 388 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 PRR23BQ6ZRT6 265 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 PQLC1Q8N2U9 271 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 GPR150Q8NGU9 434 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 TMED5Q9Y3A6 229 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 RNF11Q9Y3C5 154 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 MAP4K5Q9Y4K4 846 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 FER1L6Q2WGJ9 1857 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 KRT87PA6NCN2 255 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 NDUFB5O43674 189 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 SERPINI2O75830 405 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 UMPSP11172 480 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 RUNX1T1Q06455 604 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 SPPL2CQ8IUH8 684 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 MFSD6LQ8IWD5 586 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 DEFB119Q8N690 84 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 CADM1Q9BY67 442 aaKnown RBP14.69□□□□□ -0.06
USP47-207ENST00000527733 A0A0G2JN53 185 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 PRAMEF12O95522 483 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 PRSS56P0CW18 603 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 GJA4P35212 333 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 CYP4F3Q08477 520 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 SUSD1Q6UWL2 747 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 GPR141Q7Z602 305 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 SLC9B2Q86UD5 537 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 LMX1AQ8TE12 382 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 SEC14L3Q9UDX4 400 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 WFS1O76024 890 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 OXTRP30559 389 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 HSPB3Q12988 150 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 TRIM25Q14258 630 aaKnown RBP14.69□□□□□ -0.06
USP47-207ENST00000527733 OFCC1Q8IZS5 231 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 CAMKVQ8NCB2 501 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 DENND1AQ8TEH3 1009 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 BOCQ9BWV1 1114 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 TMEM245Q9H330 911 aa14.69□□□□□ -0.06
USP47-207ENST00000527733 A0A0J9YVX5 310 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 PLK4O00444 970 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 PDPK1O15530 556 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 ERI3O43414 337 aaKnown RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 TNFAIP8O95379 198 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 ADCK1Q86TW2 530 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 MDGA1Q8NFP4 955 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 SLC47A1Q96FL8 570 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 REXO5Q96IC2 774 aaKnown RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 HS3ST2Q9Y278 367 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 EIF3FO00303 357 aaPredicted RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 GABBR2O75899 941 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 SCELO95171 688 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 SHMT2P34897 504 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 SLC6A11P48066 632 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 OR10A6Q8NH74 314 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 SLC9A6Q92581 669 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 KCNA7Q96RP8 456 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 NELL2Q99435 816 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 ANKHQ9HCJ1 492 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 LHX3Q9UBR4 397 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 H3BNH8 94 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 B4GALT3O60512 393 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 ERN1O75460 977 aaKnown RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 ITGAXP20702 1163 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 EFNA1P20827 205 aaPredicted RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 NUP107P57740 925 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 DGKKQ5KSL6 1271 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 TANGO2Q6ICL3 276 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 C16orf87Q6PH81 154 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 EIF3MQ7L2H7 374 aaKnown RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 GATAD2AQ86YP4 633 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 NPAS3Q8IXF0 933 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 METTL21AQ8WXB1 218 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 NACC2Q96BF6 587 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 FNDC11Q9BVV2 318 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 TREX1Q9NSU2 369 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 ZNF282Q9UDV7 671 aaPredicted RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 MRTO4Q9UKD2 239 aaKnown RBP14.68□□□□□ -0.06
USP47-207ENST00000527733 TPRKBQ9Y3C4 175 aa14.68□□□□□ -0.06
USP47-207ENST00000527733 PEX1O43933 1283 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 SERPINB1P30740 379 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 ZNF789Q5FWF6 425 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 TEX26Q8N6G2 289 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 TRPV3Q8NET8 790 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 MYRFQ9Y2G1 1151 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 DGKBQ9Y6T7 804 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 GTPBP1O00178 669 aaKnown RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 AURKAO14965 403 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 FAM20BO75063 409 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 CCNYL3P0C7X3 344 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 RPS3P23396 243 aaKnown RBP eCLIP14.67□□□□□ -0.06
USP47-207ENST00000527733 AVPR1BP47901 424 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 RPL6Q02878 288 aaKnown RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 RIPK1Q13546 671 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 HKDC1Q2TB90 917 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 C10orf62Q5T681 223 aaPredicted RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 NATD1Q8N6N6 113 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 DENND2DQ9H6A0 471 aaPredicted RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 S100A14Q9HCY8 104 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 TRPS1Q9UHF7 1281 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 PLAGL1Q9UM63 463 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 F5P12259 2224 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms