RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MAGP20916 626 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 OAS2P29728 719 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 RORAP35398 523 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 CBSP35520 551 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 CARSP49589 748 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 C19orf57Q0VDD7 668 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 CUL1Q13616 776 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 CYP2A13Q16696 494 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 UGT3A1Q6NUS8 523 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 C16orf46Q6P387 395 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 GALNT7Q86SF2 657 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 CD200R1Q8TD46 325 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 CFAP36Q96G28 342 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 SEMA4CQ9C0C4 833 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 PLAC1Q9HBJ0 212 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 PPANQ9NQ55 473 aaKnown RBP25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 PLCL2Q9UPR0 1127 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 AP1M2Q9Y6Q5 423 aa25.38■■□□□ 1.65
TSPAN4-217ENST00000527644 SNRNP200O75643 2136 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 H3BMH7 237 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 MYO1CO00159 1063 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 EIF3FO00303 357 aaPredicted RBP25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 ZNF749O43361 778 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 CREG1O75629 220 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 OR2B3O76000 313 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 RPS15P62841 145 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 FRG1Q14331 258 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 DEFB110Q30KQ9 67 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 STEAP4Q687X5 459 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 FBXO15Q8NCQ5 510 aaPredicted RBP25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 ZUFSPQ96AP4 578 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 WDR83Q9BRX9 315 aaKnown RBP25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 ERP44Q9BS26 406 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 PCMTD2Q9NV79 361 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 KLHL20Q9Y2M5 609 aa25.37■■□□□ 1.65
TSPAN4-217ENST00000527644 KRT87PA6NCN2 255 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 HCRTR1O43613 425 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 AHSGP02765 367 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 SFTPCP11686 197 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 GABRB3P28472 473 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 PTPN4P29074 926 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 SKIV2L2P42285 1042 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 CCR10P46092 362 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 CBLBQ13191 982 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 ARHGAP19Q14CB8 494 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 TEDDM1Q5T9Z0 273 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 FIGLAQ6QHK4 219 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 CYHR1Q6ZMK1 362 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 ZNF843Q8N446 348 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 ASB11Q8WXH4 323 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 SEC14L1Q92503 715 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 DPH2Q9BQC3 489 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 SPRTNQ9H040 489 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 CHST8Q9H2A9 424 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 ACTL8Q9H568 366 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 TAS2R13Q9NYV9 303 aa25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 TRMT6Q9UJA5 497 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 FARSAQ9Y285 508 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-217ENST00000527644 TARM1B6A8C7 271 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 E7ESA3 106 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 FAM87AP0C7U9 286 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 ERGP11308 486 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 HSD17B2P37059 387 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 MRPS25P82663 173 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 PDIA2Q13087 525 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 ERV3-1Q14264 604 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 TLDC1Q6P9B6 456 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 ANKMY2Q8IV38 441 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 SYTL1Q8IYJ3 562 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 NDNQ99608 321 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 EURLQ9NYK6 297 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 WHRNQ9P202 907 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 SEC16AO15027 2179 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 CFAP46Q8IYW2 2715 aa25.35■■□□□ 1.65
TSPAN4-217ENST00000527644 A0A1W2PPV9 198 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 ZNF839A8K0R7 811 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 GFYI3L273 518 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 RAD51CO43502 376 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 RAB40ALP0C0E4 278 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 C2orf54Q08AI8 447 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 CALCOCO2Q13137 446 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 FASTKQ14296 549 aaKnown RBP25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 DEFB109BQ30KR1 87 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 ZC3H12BQ5HYM0 836 aaKnown RBP25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 ATP1A1-AS1Q5TC04 95 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 FCRL6Q6DN72 434 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 LRRC8EQ6NSJ5 796 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 TRMT10BQ6PF06 316 aaKnown RBP25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 MCATQ8IVS2 390 aaKnown RBP25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 CPNE9Q8IYJ1 553 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 OR2A1Q8NGT9 310 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 SMPDL3AQ92484 453 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 RUFY1Q96T51 708 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 PKP4Q99569 1192 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 ADNPQ9H2P0 1102 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 GEMIN8Q9NWZ8 242 aaKnown RBP25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 KLK4Q9Y5K2 254 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 COL6A6A6NMZ7 2263 aa25.34■■□□□ 1.65
TSPAN4-217ENST00000527644 ZSCAN9O15535 394 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms