RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 ACP5P13686 325 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 PAMP19021 973 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 MSH3P20585 1137 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 CCR7P32248 378 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 TTPAP49638 278 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 TUBB4BP68371 445 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 CHAF1BQ13112 559 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 THOC5Q13769 683 aaKnown RBP10.59□□□□□ -0.71
NEDD8-204ENST00000526430 IL11RAQ14626 422 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 EFTUD2Q15029 972 aaKnown RBP eCLIP10.59□□□□□ -0.711e-8■■■□□ 18.3
NEDD8-204ENST00000526430 UAP1Q16222 522 aaPredicted RBP10.59□□□□□ -0.71
NEDD8-204ENST00000526430 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.59□□□□□ -0.71
NEDD8-204ENST00000526430 RBM20Q5T481 1227 aaKnown RBP10.59□□□□□ -0.71
NEDD8-204ENST00000526430 METRNLQ641Q3 311 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 MRNIPQ6NTE8 343 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 SLC30A9Q6PML9 568 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 NAPRTQ6XQN6 538 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 GALNT7Q86SF2 657 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 SYVN1Q86TM6 617 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 LRRTM4Q86VH4 590 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 LMNTD2Q8IXW0 634 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 MMP21Q8N119 569 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 KRT222Q8N1A0 295 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 OR2L2Q8NH16 312 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 FBF1Q8TES7 1133 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 AENQ8WTP8 325 aaKnown RBP10.59□□□□□ -0.71
NEDD8-204ENST00000526430 CT55Q8WUE5 264 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 UBXN4Q92575 508 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 SLC38A3Q99624 504 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 SLC30A3Q99726 388 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 TIMM29Q9BSF4 260 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 GPR87Q9BY21 358 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 KLC4Q9NSK0 619 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 TBC1D29Q9UFV1 150 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 PADI1Q9ULC6 663 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 KCNK6Q9Y257 313 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 DOCK10Q96BY6 2186 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 C17orf113A0A1B0GUU1 675 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 MGAT4DA6NG13 374 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ARGFXA6NJG6 315 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 PRMT5O14744 637 aaPredicted RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 LRRTM2O43300 516 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ZG16O60844 167 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 NIPSNAP2O75323 286 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 GPC4O75487 556 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 NDUFS3O75489 264 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 FAM155BO75949 473 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 KIAA0754O94854 1291 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 GCAP28676 217 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 PDHA2P29803 388 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 FMO4P31512 558 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 AKT1P31749 480 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 EPHA4P54764 986 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ART3Q13508 389 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 NFE2L1Q14494 772 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 GBX1Q14549 363 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 PLA2G4EQ3MJ16 856 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 KBTBD12Q3ZCT8 623 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 CRB2Q5IJ48 1285 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ZNF449Q6P9G9 518 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ABRAXAS1Q6UWZ7 409 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 WASH2PQ6VEQ5 465 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ZC3HC1Q86WB0 502 aaKnown RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 GALNT13Q8IUC8 556 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 VRK3Q8IV63 474 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 SFRP1Q8N474 314 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 GIMAP7Q8NHV1 300 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 HEXDCQ8WVB3 486 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ZNF514Q96K75 400 aaPredicted RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 SMAD5Q99717 465 aaKnown RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 CCM2Q9BSQ5 444 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 NUDT9Q9BW91 350 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 EPB41L1Q9H4G0 881 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 LHX9Q9NQ69 397 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 WASH6PQ9NQA3 447 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 INTS10Q9NVR2 710 aaKnown RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 C5AR2Q9P296 337 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ZNF624Q9P2J8 865 aaPredicted RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 MTRF1LQ9UGC7 380 aaKnown RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 CCDC88CQ9P219 2028 aa10.58□□□□□ -0.72
NEDD8-204ENST00000526430 ZNF469Q96JG9 3925 aaPredicted RBP10.58□□□□□ -0.72
NEDD8-204ENST00000526430 MAP1AP78559 2803 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 TOX3O15405 576 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 CTIFO43310 598 aaKnown RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 ABCB7O75027 752 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 WISP3O95389 354 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 FGF5P12034 268 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 PKMP14618 531 aaKnown RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 CAPN3P20807 821 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 AOAHP28039 575 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 ACADLP28330 430 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 PTPN4P29074 926 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 CLCN7P51798 805 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 CDKN2DP55273 166 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 EIF3BP55884 814 aaKnown RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 FOXM1Q08050 763 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 LRP8Q14114 963 aa10.57□□□□□ -0.72
NEDD8-204ENST00000526430 PLEKHN1Q494U1 663 aaPredicted RBP10.57□□□□□ -0.72
NEDD8-204ENST00000526430 AARS2Q5JTZ9 985 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms