RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
SMPD1-202ENST00000526280 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 ACBD3Q9H3P7 528 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 VIPAS39Q9H9C1 493 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 OCIAD1Q9NX40 245 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 CTNNAL1Q9UBT7 734 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 TLK1Q9UKI8 766 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 ACOT9Q9Y305 439 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 PCM1Q15154 2024 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 A0A087X1B8 175 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 A0A096LPK6 155 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 NPEPPSL1A6NEC2 478 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 SLC9B1P1A6NJY1 282 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 EFCAB7A8K855 629 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 B4E171 279 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 TRIM49D1C9J1S8 452 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 E7ENX8 843 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 KRT37O76014 449 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 ZBTB11O95625 1053 aaPredicted RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 JMJD7P0C870 316 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 FGF3P11487 239 aaPredicted RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 CCL4P13236 92 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 IMPA1P29218 277 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 OAS2P29728 719 aaKnown RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 GMPRP36959 345 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 TSPAN7P41732 249 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 MAGEA12P43365 314 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 SEPHS1P49903 392 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 AP1S2P56377 157 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 GABREP78334 506 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 TAP2Q03519 686 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 DLG1Q12959 904 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 CSHL1Q14406 222 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 TSNQ15631 228 aaKnown RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 PPP1R3AQ16821 1122 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 MBOAT1Q6ZNC8 495 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 ADAMTSL2Q86TH1 951 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 TBC1D1Q86TI0 1168 aaPredicted RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 TAX1BP1Q86VP1 789 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 LRRC56Q8IYG6 542 aaPredicted RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 CNPY4Q8N129 248 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 BMPERQ8N8U9 685 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 SMPDL3AQ92484 453 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 KIAA1191Q96A73 305 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 NXPE2Q96DL1 559 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 MTBPQ96DY7 904 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 SLC46A1Q96NT5 459 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 UNKQ9C0B0 810 aaKnown RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 PPCSQ9HAB8 311 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 IGSF5Q9NSI5 407 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 ARL15Q9NXU5 204 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 STOX2Q9P2F5 926 aaPredicted RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 OARD1Q9Y530 152 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 AK5Q9Y6K8 562 aa12.48□□□□□ -0.41
SMPD1-202ENST00000526280 SNRNP200O75643 2136 aaKnown RBP12.48□□□□□ -0.41
SMPD1-202ENST00000526280 A0A0J9YY10 115 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 TNFSF15O95150 251 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 FKBP9O95302 570 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 LTA4HP09960 611 aaKnown RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 NUDT17P0C025 328 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 PVRP15151 417 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 ST6GAL1P15907 406 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 ITIH1P19827 911 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 ETV5P41161 510 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 MLLT3P42568 568 aaPredicted RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 HSD11B2P80365 405 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 CDKL1Q00532 357 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 MC2RQ01718 297 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 SF1Q15637 639 aaKnown RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 TAF1BQ53T94 588 aaPredicted RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 FOXR1Q6PIV2 292 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 SUSD1Q6UWL2 747 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 TIFABQ6ZNK6 161 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 ISCA2Q86U28 154 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 TRIM73Q86UV7 250 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 TDRPQ86YL5 185 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 SYTL1Q8IYJ3 562 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 CENPLQ8N0S6 344 aaPredicted RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 D2HGDHQ8N465 521 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 MREGQ8N565 214 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 OR2A1Q8NGT9 310 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 PTERQ96BW5 349 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 NXNL1Q96CM4 212 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 TRAPPC9Q96Q05 1148 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 NMRAL1Q9HBL8 299 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 FBXO8Q9NRD0 319 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 SIDT1Q9NXL6 827 aaKnown RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 UTP6Q9NYH9 597 aaKnown RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
SMPD1-202ENST00000526280 PISDQ9UG56 409 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 BTRCQ9Y297 605 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 PCDHB11Q9Y5F2 797 aa12.47□□□□□ -0.41
SMPD1-202ENST00000526280 WDFY3Q8IZQ1 3526 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 IQANK1A0A1B0GTG1 560 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 PABPN1LA6NDY0 278 aaKnown RBP12.46□□□□□ -0.41
SMPD1-202ENST00000526280 BRINP1O60477 761 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms