RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CCDC68Q9H2F9 335 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 FBXO6Q9NRD1 293 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 C20orf96Q9NUD7 363 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 INTS10Q9NVR2 710 aaKnown RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 GALPQ9UBC7 116 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 DHCR7Q9UBM7 475 aaKnown RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 ASIC3Q9UHC3 531 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 GPN3Q9UHW5 284 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 SRPK3Q9UPE1 567 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 PADI2Q9Y2J8 665 aa17.85■□□□□ 0.45
CAPN1-203ENST00000525013 SETXQ7Z333 2677 aaKnown RBP17.85■□□□□ 0.45
CAPN1-203ENST00000525013 H3BMH7 237 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 K7EM74 188 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 CES2O00748 559 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 USP1O94782 785 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 ATP5DP30049 168 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 PTGIRP43119 386 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 TLE1Q04724 770 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 ACSBG2Q5FVE4 666 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 COLEC12Q5KU26 742 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 ZNF385CQ66K41 422 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-203ENST00000525013 TCTN3Q6NUS6 607 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 FIGLAQ6QHK4 219 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 ASB18Q6ZVZ8 466 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 DENND6AQ8IWF6 608 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 NAT8LQ8N9F0 302 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 C17orf62Q9BQA9 187 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 DDX47Q9H0S4 455 aaKnown RBP17.84■□□□□ 0.45
CAPN1-203ENST00000525013 CLMPQ9H6B4 373 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 ACSS2Q9NR19 701 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 ANAPC2Q9UJX6 822 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 HEATR5BQ9P2D3 2071 aa17.84■□□□□ 0.45
CAPN1-203ENST00000525013 ZCWPW2A0A1B0GU75 182 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 MATN4O95460 622 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 TCP1P17987 556 aaKnown RBP17.83■□□□□ 0.44
CAPN1-203ENST00000525013 ALAS2P22557 587 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 PSMB5P28074 263 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 MAGEA3P43357 314 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 CCL11P51671 97 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 DCDP81605 110 aaKnown RBP17.83■□□□□ 0.44
CAPN1-203ENST00000525013 GBX1Q14549 363 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 SLC9A5Q14940 896 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 LONRF1Q17RB8 773 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 KLHL38Q2WGJ6 581 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 AGGF1Q8N302 714 aaeCLIP17.83■□□□□ 0.44
CAPN1-203ENST00000525013 PROKR1Q8TCW9 393 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 ADAMTS17Q8TE56 1095 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 SIGLEC10Q96LC7 697 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 GBP5Q96PP8 586 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 ING2Q9H160 280 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 EPN3Q9H201 632 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 IFT80Q9P2H3 777 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-203ENST00000525013 NDOR1Q9UHB4 597 aa17.83■□□□□ 0.44
CAPN1-203ENST00000525013 USP27XA6NNY8 438 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 PRICKLE3O43900 615 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-203ENST00000525013 FKBP9O95302 570 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 OTX2P32243 289 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 CASRP41180 1078 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 SLC1A2P43004 574 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 CSRP3P50461 194 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 KLRB1Q12918 225 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 TTLL9Q3SXZ7 439 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 NKAIN1Q4KMZ8 207 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 ZC3H12BQ5HYM0 836 aaKnown RBP17.82■□□□□ 0.44
CAPN1-203ENST00000525013 RNASEH2BQ5TBB1 312 aaKnown RBP17.82■□□□□ 0.44
CAPN1-203ENST00000525013 FCRL6Q6DN72 434 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 TEX19Q8NA77 164 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 CALML6Q8TD86 181 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 DENND1AQ8TEH3 1009 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 DLG3Q92796 817 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 ZUFSPQ96AP4 578 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 CAPZA3Q96KX2 299 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 MIPEPQ99797 713 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 DHRS4Q9BTZ2 278 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 SLC25A23Q9BV35 468 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 SPATA7Q9P0W8 599 aa17.82■□□□□ 0.44
CAPN1-203ENST00000525013 PTRH2Q9Y3E5 179 aaKnown RBP17.82■□□□□ 0.44
CAPN1-203ENST00000525013 PRRC2CQ9Y520 2896 aaKnown RBP17.82■□□□□ 0.44
CAPN1-203ENST00000525013 ARHGEF33A8MVX0 844 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 CATP04040 527 aaKnown RBP17.81■□□□□ 0.44
CAPN1-203ENST00000525013 CLCN7P51798 805 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 PGDP52209 483 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 GNG11P61952 73 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 TSTA3Q13630 321 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-203ENST00000525013 HSP90AA5PQ58FG0 334 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 TTLL10Q6ZVT0 673 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 RAB43Q86YS6 212 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
CAPN1-203ENST00000525013 OR2L3Q8NG85 312 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 OR9A1PQ8NGU1 263 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 HMGCLL1Q8TB92 370 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 SLC30A3Q99726 388 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 SELENOSQ9BQE4 189 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 ACAT2Q9BWD1 397 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 FAM114A2Q9NRY5 505 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 FBXO5Q9UKT4 447 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 FAM169AQ9Y6X4 670 aa17.81■□□□□ 0.44
CAPN1-203ENST00000525013 ASH1LQ9NR48 2969 aaKnown RBP17.81■□□□□ 0.44
CAPN1-203ENST00000525013 MDC1Q14676 2089 aaKnown RBP17.81■□□□□ 0.44
CAPN1-203ENST00000525013 FLNCQ14315 2725 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms