RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 APBB3O95704 486 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CXCL14O95715 111 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CAVIN2O95810 425 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 HEXAP06865 529 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZNF286BP0CG31 522 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 RNF224P0DH78 156 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 HLA-EP13747 358 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 DARSP14868 501 aaKnown RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 EPCAMP16422 314 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZNF8P17098 575 aaPredicted RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 MAOAP21397 527 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CORO1AP31146 461 aaKnown RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 CD52P31358 61 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 DDIT3P35638 169 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 TRAPPC10P48553 1259 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 HNRNPH2P55795 449 aaKnown RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 ACTR2P61160 394 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 SETQ01105 290 aaPredicted RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 PMP22Q01453 160 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 SMARCB1Q12824 385 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 PLD1Q13393 1074 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 POSTNQ15063 836 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 TIGD6Q17RP2 521 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 DUOXA1Q1HG43 343 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 C2orf68Q2NKX9 166 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 USP41Q3LFD5 358 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CCDC38Q502W7 563 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CLLU1OSQ5K130 101 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 LCE3AQ5TA76 89 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 LIN9Q5TKA1 542 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ARHGEF16Q5VV41 709 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 TPGS2Q68CL5 300 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 LRRC8EQ6NSJ5 796 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 SLC36A4Q6YBV0 504 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ASB18Q6ZVZ8 466 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 HAUS6Q7Z4H7 955 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 SLC35F3Q8IY50 421 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 HDDC3Q8N4P3 179 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 PLD5Q8N7P1 536 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 DMBX1Q8NFW5 382 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 URGCPQ8TCY9 931 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 SDR42E1Q8WUS8 393 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 TMEM190Q8WZ59 177 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CNOT9Q92600 299 aaKnown RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 SMARCD2Q92925 531 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ANKRD9Q96BM1 317 aaPredicted RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 KIF1BPQ96EK5 621 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZNF578Q96N58 590 aaPredicted RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 NEUROD6Q96NK8 337 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZNF599Q96NL3 588 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 TSPAN18Q96SJ8 248 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 MAP7D2Q96T17 732 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ADNPQ9H2P0 1102 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 AZI2Q9H6S1 392 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 LY9Q9HBG7 655 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZFP14Q9HCL3 533 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CNGB3Q9NQW8 809 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 SMYD2Q9NRG4 433 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 STARD5Q9NSY2 213 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 SETD4Q9NVD3 440 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 PAG1Q9NWQ8 432 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 CLIP2Q9UDT6 1046 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 PILRBQ9UKJ0 227 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ASB3Q9Y575 518 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 PIAS3Q9Y6X2 628 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 KIF26AQ9ULI4 1882 aaPredicted RBP1.58□□□□□ -2.16
CD44-212ENST00000524922 NIPBLQ6KC79 2804 aaeCLIP1.58□□□□□ -2.16
CD44-212ENST00000524922 COL6A5A8TX70 2615 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 NSD1Q96L73 2696 aaPredicted RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 AKAP9Q99996 3911 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CELSR1Q9NYQ6 3014 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 COL5A1P20908 1838 aaPredicted RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 APCP25054 2843 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ARHGAP10A1A4S6 786 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 GOLGA6L9A6NEM1 432 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 C5orf60A6NFR6 353 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 SH2D7A6NKC9 451 aaPredicted RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 ZNF263O14978 683 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 AP5Z1O43299 807 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TNFSF14O43557 240 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 HMMRO75330 724 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 C22orf31O95567 290 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 FTCDO95954 541 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 IGLV3-19P01714 112 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 GP1BAP07359 652 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 MMP2P08253 660 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 IFIT2P09913 472 aaKnown RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 POLR2MP0CAP2 368 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CCDC192P0DO97 292 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ERVK-10P10266 1014 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 G6PDP11413 515 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ETFAP13804 333 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CD59P13987 128 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 MCCP23508 829 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CHMLP26374 656 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CALML3P27482 149 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ACTN2P35609 894 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TCF7P36402 384 aaPredicted RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 USP8P40818 1118 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms