RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 KCNC1P48547 511 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 CDKN1CP49918 316 aaPredicted RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 NXPH1P58417 271 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SIM1P81133 766 aaPredicted RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 RALGDSQ12967 914 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 BNIP3Q12983 259 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 PTK2BQ14289 1009 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 PTPRRQ15256 657 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 GGTA1PQ4G0N0 100 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 CCDC157Q569K6 752 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ZNF542PQ5EBM4 170 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 XKR7Q5GH72 579 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 TPRG1LQ5T0D9 272 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 MRPL14Q6P1L8 145 aaKnown RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 C16orf89Q6UX73 402 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 LIPIQ6XZB0 460 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 GCNT7Q6ZNI0 430 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 LARP4Q71RC2 724 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS11-201ENST00000524454 LRRC70Q7Z2Q7 622 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SPATA19Q7Z5L4 167 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 CPNE9Q8IYJ1 553 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 FAM9CQ8IZT9 166 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SPATA6LQ8N4H0 392 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ENDOVQ8N8Q3 282 aaKnown RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 RBM15BQ8NDT2 890 aaKnown RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 FAM13CQ8NE31 585 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 OR13H1Q8NG92 308 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 BTN2A2Q8WVV5 523 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ASZ1Q8WWH4 475 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ATL1Q8WXF7 558 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 DTD2Q96FN9 168 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 DCUN1D1Q96GG9 259 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 METTL2AQ96IZ6 378 aaKnown RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 LINC00615Q96LM1 132 aaPredicted RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 OR52B2Q96RD2 323 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 UCN2Q96RP3 112 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SERPINI1Q99574 410 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 MIPEPQ99797 713 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SLC25A23Q9BV35 468 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 NTMT1Q9BV86 223 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SLC12A9Q9BXP2 914 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 CADM1Q9BY67 442 aaKnown RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 TRIM54Q9BYV2 358 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SLC29A3Q9BZD2 475 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 NUF2Q9BZD4 464 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ZDHHC5Q9C0B5 715 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 DCLRE1BQ9H816 532 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 RIC8BQ9NVN3 520 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ARMCX1Q9P291 453 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 BCAP29Q9UHQ4 241 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 GPR34Q9UPC5 381 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 PCDHB11Q9Y5F2 797 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 DNAJC15Q9Y5T4 150 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 LRP4O75096 1905 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 A0A0U1RQS6 177 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 C17orf113A0A1B0GUU1 675 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 PABPN1LA6NDY0 278 aaKnown RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 POM121BA6NF01 834 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 B2RBV5 119 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 E9PBE3 544 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 PRAMEF26H0Y7S4 382 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 GFYI3L273 518 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 K7EPI3 171 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 IFRD1O00458 451 aaPredicted RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 UBFD1O14562 309 aaKnown RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 LIN7AO14910 233 aaPredicted RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 UBDO15205 165 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 TSPAN6O43657 245 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 HYAL3O43820 417 aaPredicted RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 VEGFDO43915 354 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 KLHL41O60662 606 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 GPC4O75487 556 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 CIB2O75838 187 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 NPPAP01160 153 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 ANXA5P08758 320 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 EBLN1P0CF75 366 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 THEGLP0DJG4 465 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 CEACAM1P13688 526 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 NCF2P19878 526 aaPredicted RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 CYP2A7P20853 494 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 CSRP1P21291 193 aaKnown RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 PIK3R1P27986 724 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 EPHA3P29320 983 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 AKT2P31751 481 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 GCKP35557 465 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 PGM1P36871 562 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 PRLHRP49683 370 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 CCNG1P51959 295 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 CLDN6P56747 220 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 STX1BP61266 288 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 RPS21P63220 83 aaKnown RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 B4GALNT1Q00973 533 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 MAD2L1Q13257 205 aaPredicted RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 CYLC2Q14093 348 aaPredicted RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 UBAP2LQ14157 1087 aaKnown RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 TCEA2Q15560 299 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 PDCD2Q16342 344 aaPredicted RBP6.89□□□□□ -1.31
VPS11-201ENST00000524454 ZNF423Q2M1K9 1284 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
VPS11-201ENST00000524454 IL27RAQ6UWB1 636 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms