RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	ADAM23	O75077	832 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	DNAJB5	O75953	348 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	GOT2	P00505	430 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ALPL	P05186	524 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	FGF1	P05230	155 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	UGT2B4	P06133	528 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	THBS1	P07996	1170 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	TFPT	P0C1Z6	253 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	THRB	P10828	461 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	GGT1	P19440	569 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ITIH1	P19827	911 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	HLA-DPA1	P20036	260 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	CCNA2	P20248	432 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SDHB	P21912	280 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	CRHBP	P24387	322 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ACVR2A	P27037	513 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	EEF1D	P29692	281 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	CCR1	P32246	355 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	CD86	P42081	329 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	PGF	P49763	221 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZNF140	P52738	457 aa	Predicted RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	STC1	P52823	247 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ARSF	P54793	590 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	DIO3	P55073	304 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ERVK-8	P63133	956 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	BNIP3	Q12983	259 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	AQP6	Q13520	282 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	RUNX3	Q13761	415 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	POLD3	Q15054	466 aa	Predicted RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	PCSK7	Q16549	785 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	AASDH	Q4L235	1098 aa	Predicted RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	BROX	Q5VW32	411 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	C2orf16	Q68DN1	1984 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	LAIR2	Q6ISS4	152 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	DLEU7	Q6UYE1	221 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	LINC00299	Q6ZSB3	139 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	RNF165	Q6ZSG1	346 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SLC16A12	Q6ZSM3	486 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	GVINP1	Q7Z2Y8	2422 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	DGLUCY	Q7Z3D6	616 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	TFAP2D	Q7Z6R9	452 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	LDB1	Q86U70	411 aa	Predicted RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZC3H7A	Q8IWR0	971 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SCN4B	Q8IWT1	228 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	PARP8	Q8N3A8	854 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SFRP1	Q8N474	314 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SLC15A4	Q8N697	577 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	PNPLA1	Q8N8W4	532 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	OR52E4	Q8NGH9	312 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	RAB2B	Q8WUD1	216 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZNF566	Q969W8	418 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	TUBGCP3	Q96CW5	907 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	TRMT2B	Q96GJ1	504 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	TBATA	Q96M53	351 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZNF599	Q96NL3	588 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	TRIB3	Q96RU7	358 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	PSD2	Q9BQI7	771 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	MRO	Q9BYG7	248 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	PAIP1	Q9H074	479 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SIK2	Q9H0K1	926 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SOX17	Q9H6I2	414 aa	Predicted RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	CARS2	Q9HA77	564 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	NMUR1	Q9HB89	426 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	NT5M	Q9NPB1	228 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	AKIP1	Q9NQ31	210 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	INTS7	Q9NVH2	962 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	SMPD4	Q9NXE4	827 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	GIN1	Q9NXP7	522 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	UXT	Q9UBK9	157 aa	Predicted RBP	7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	ERGIC3	Q9Y282	383 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	BTRC	Q9Y297	605 aa		7.65	□□□□□ -1.18
SPIDR-223	ENST00000524033	TRAV19	A0A0A6YYK7	116 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	OTOL1	A6NHN0	477 aa	Predicted RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	CHURC1-FNTB	B4DL54	471 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033		J3KR12	359 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	IFRD1	O00458	451 aa	Predicted RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	ANKRD28	O15084	1053 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	CD3EAP	O15446	510 aa	Known RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	EFS	O43281	561 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	NOL3	O60936	208 aa	Known RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	ATG13	O75143	517 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	DEAF1	O75398	565 aa	Predicted RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	CLPX	O76031	633 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	SEC24D	O94855	1032 aa	Predicted RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	ESRRB	O95718	433 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	TSPAN12	O95859	305 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	EPO	P01588	193 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	ALB	P02768	609 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	ANXA6	P08133	673 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	LINC00032	P0C843	101 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	OCM2	P0CE71	109 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	OCM	P0CE72	109 aa	Predicted RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	UROS	P10746	265 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	TCF3	P15923	654 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	NCK1	P16333	377 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZNF182	P17025	639 aa	Predicted RBP	7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	PCMT1	P22061	227 aa		7.64	□□□□□ -1.19
SPIDR-223	ENST00000524033	CES1	P23141	567 aa		7.64	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms