RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ABI3BPQ7Z7G0 1075 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FAM72BQ86X60 149 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 KLHL7Q8IXQ5 586 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 TIGD4Q8IY51 512 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 SIX6OS1Q8N1H7 587 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 GOT1L1Q8NHS2 421 aaPredicted RBP3.61□□□□□ -1.83
SKP1-212ENST00000523966 KCNE4Q8WWG9 221 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 PROX1Q92786 737 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 CENPTQ96BT3 561 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 CCDC114Q96M63 670 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FNBP1Q96RU3 617 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 MTMR12Q9C0I1 747 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FAM49AQ9H0Q0 323 aaPredicted RBP3.61□□□□□ -1.83
SKP1-212ENST00000523966 FZD8Q9H461 694 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 TRPV4Q9HBA0 871 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 A4GALTQ9NPC4 353 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 GSN-AS1Q9NRJ2 163 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FLRT3Q9NZU0 649 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 TRIM17Q9Y577 477 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 LOC101059948A0A1B0GTJ6 334 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 C2orf81A6NN90 581 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ENO4A6NNW6 628 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ARPC2O15144 300 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 SNX3O60493 162 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 SLC22A3O75751 556 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 GBAP04062 536 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 EDN1P05305 212 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 EPCAMP16422 314 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 HOXB6P17509 224 aaKnown RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 CYP11B2P19099 503 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 HOXC8P31273 242 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 CSTF2P33240 577 aaKnown RBP eCLIP3.6□□□□□ -1.83
SKP1-212ENST00000523966 PTGER4P35408 488 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 SOAT1P35610 550 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 PRKCIP41743 596 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ITGA7Q13683 1181 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 RRS1Q15050 365 aaKnown RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 TWISTNBQ3B726 338 aaPredicted RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 ITPRIPL2Q3MIP1 535 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ALDH1L2Q3SY69 923 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 FAM76BQ5HYJ3 339 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 WDR38Q5JTN6 314 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 C11orf88Q6PI97 169 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 TRAT1Q6PIZ9 186 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 CEACAM20Q6UY09 585 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ZNF771Q7L3S4 317 aaPredicted RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 SPATA19Q7Z5L4 167 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 AMIGO1Q86WK6 493 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 DCUN1D3Q8IWE4 304 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 EID3Q8N140 333 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 NKAIN3Q8N8D7 197 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 OR11H4Q8NGC9 324 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 OR13C3Q8NGS6 347 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 VANGL1Q8TAA9 524 aaPredicted RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 C9orf43Q8TAL5 461 aaPredicted RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 GRAPLQ8TC17 118 aaPredicted RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 GRHL3Q8TE85 626 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 PHLDA1Q8WV24 401 aaPredicted RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 PGM2Q96G03 612 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ERO1AQ96HE7 468 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 LAT2Q9GZY6 243 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ZMYND12Q9H0C1 365 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 CHST11Q9NPF2 352 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 PPANQ9NQ55 473 aaKnown RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 INTS10Q9NVR2 710 aaKnown RBP3.6□□□□□ -1.83
SKP1-212ENST00000523966 ADPRHL2Q9NX46 363 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 ACAD8Q9UKU7 415 aa3.6□□□□□ -1.83
SKP1-212ENST00000523966 CC2D2AQ9P2K1 1620 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 A0A087WV48 116 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 TRAV24A0A0B4J272 114 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 ATP6V0E1O15342 81 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 PCDH7O60245 1069 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 ZNF432O94892 652 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 PGLSO95336 258 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 CSN3P07498 182 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 EPORP19235 508 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 NR1D1P20393 614 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 CA4P22748 312 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 CEACAM8P31997 349 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 CTNNA1P35221 906 aaKnown RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 CRKLP46109 303 aaKnown RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 NAGLUP54802 743 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 MAZP56270 477 aaKnown RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 UBASH3AP57075 661 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 CDR2Q01850 454 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 ZNF415Q09FC8 603 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 PTK6Q13882 451 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 NPTX1Q15818 432 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 ZC2HC1CQ53FD0 456 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 SLC35D3Q5M8T2 416 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 FAM91A1Q658Y4 838 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 RBMS3Q6XE24 437 aaKnown RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 TRPT1Q86TN4 253 aaKnown RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 RTN4RL2Q86UN3 420 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 TMCO5AQ8N6Q1 288 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 NIPA2Q8N8Q9 360 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 RASGEF1AQ8N9B8 481 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 ZNF383Q8NA42 475 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms