RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PNLIPRP1P54315 467 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 AP1S2P56377 157 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 TAS2R39P59534 338 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 CLN3Q13286 438 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 SF1Q15637 639 aaKnown RBP12.11□□□□□ -0.47
VEGFA-225ENST00000523950 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 PMEPA1Q969W9 287 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 ZUFSPQ96AP4 578 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 ZNF501Q96CX3 271 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-225ENST00000523950 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 CCDC138Q96M89 665 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 PPM1MQ96MI6 270 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 PKP4Q99569 1192 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 CTRCQ99895 268 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 TRIM54Q9BYV2 358 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 SPRY4Q9C004 299 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 ACSS3Q9H6R3 686 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-225ENST00000523950 ANKMY1Q9P2S6 941 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 NOVA2Q9UNW9 492 aaKnown RBP12.11□□□□□ -0.47
VEGFA-225ENST00000523950 KLK4Q9Y5K2 254 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 ACACAQ13085 2346 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 PCM1Q15154 2024 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 WDFY3Q8IZQ1 3526 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 SNRNP200O75643 2136 aaKnown RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 TARM1B6A8C7 271 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 RAD1O60671 282 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 DLGAP3O95886 979 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 SLC16A8O95907 504 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 SYF2O95926 243 aaKnown RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 PVRP15151 417 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 STMN1P16949 149 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 SAT1P21673 171 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 CMPK1P30085 196 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 TLE3Q04726 772 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 USP10Q14694 798 aaKnown RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 KCNAB1Q14722 419 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 ZKSCAN8Q15776 578 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 FBXO38Q6PIJ6 1188 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 ZFAND4Q86XD8 727 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 NLGN4XQ8N0W4 816 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 CNPY4Q8N129 248 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 ESX1Q8N693 406 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 NLGN4YQ8NFZ3 816 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 OR2L3Q8NG85 312 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 ZNF480Q8WV37 535 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.1□□□□□ -0.475e-12■■■■■ 41.4
VEGFA-225ENST00000523950 RHOXF2Q9BQY4 288 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 ULBP3Q9BZM4 244 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 PCBD2Q9H0N5 130 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 GPAMQ9HCL2 828 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 UTP6Q9NYH9 597 aaKnown RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 CIDEBQ9UHD4 219 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 SERTAD3Q9UJW9 196 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 PILRAQ9UKJ1 303 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 NFU1Q9UMS0 254 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 MTO1Q9Y2Z2 717 aaKnown RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 URB1O60287 2271 aaKnown RBP12.1□□□□□ -0.47
VEGFA-225ENST00000523950 APC2O95996 2303 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 ASPMQ8IZT6 3477 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 CHD8Q9HCK8 2581 aa12.1□□□□□ -0.47
VEGFA-225ENST00000523950 A0A1W2PPV9 198 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 E7ENX8 843 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 PIAS1O75925 651 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 WISP3O95389 354 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 ABHD2P08910 425 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 MAGP20916 626 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 CCND1P24385 295 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 TNFRSF8P28908 595 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 IMPA1P29218 277 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 RPA3P35244 121 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 TMPRSS3P57727 454 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 RAB10P61026 200 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 ABATP80404 500 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 TAP2Q03519 686 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 ABHD18Q0P651 414 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 ZC3H12BQ5HYM0 836 aaKnown RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 MANEAQ5SRI9 462 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 CDHR3Q6ZTQ4 885 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 TRMT10CQ7L0Y3 403 aaKnown RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 ADAMTSL2Q86TH1 951 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 TRIM73Q86UV7 250 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 TAX1BP1Q86VP1 789 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 SYTL1Q8IYJ3 562 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 C2orf73Q8N5S3 287 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 OR2A1Q8NGT9 310 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 ATL1Q8WXF7 558 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 N4BP2L2Q92802 583 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 NKD1Q969G9 470 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 NAF1Q96HR8 494 aaKnown RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 LRFN5Q96NI6 719 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 EFHD1Q9BUP0 239 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 DERL2Q9GZP9 239 aa12.09□□□□□ -0.47
VEGFA-225ENST00000523950 STOX2Q9P2F5 926 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-225ENST00000523950 ADAMTS6Q9UKP5 1117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms