RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 MSX1P28360 303 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 STX2P32856 288 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 MSH2P43246 934 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 NR2C2P49116 596 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 EPHA4P54764 986 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 CDH4P55283 916 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 NME3Q13232 169 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 DPYSQ14117 519 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PAFAH1B3Q15102 231 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 TLR1Q15399 786 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 TPSAB1Q15661 275 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 SPRED3Q2MJR0 410 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 KLHL38Q2WGJ6 581 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PLA2G4EQ3MJ16 856 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ANKRD20A2Q5SQ80 823 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 FAM72AQ5TYM5 149 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ANKRD20A1Q5TYW2 823 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 GKAP1Q5VSY0 366 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ANKRD20A3Q5VUR7 823 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 FAM72DQ6L9T8 149 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 GDPD4Q6W3E5 623 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PPP1R21Q6ZMI0 780 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ZNF534Q76KX8 674 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 TAX1BP1Q86VP1 789 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 FAM72BQ86X60 149 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 C4orf33Q8N1A6 199 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 MPP5Q8N3R9 675 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 RYBPQ8N488 228 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 CCDC197Q8NCU1 140 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 SIMC1Q8NDZ2 872 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 MCUQ8NE86 351 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ITPKCQ96DU7 683 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 HMCESQ96FZ2 354 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 CFAP36Q96G28 342 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 CABS1Q96KC9 395 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 SIGLEC10Q96LC7 697 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 MAGEB18Q96M61 343 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 OLFM3Q96PB7 478 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 TGM7Q96PF1 710 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PAFAH2Q99487 392 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 POLDIP3Q9BY77 421 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PLA2G12AQ9BZM1 189 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PPCSQ9HAB8 311 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PLAC1Q9HBJ0 212 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 POPDC2Q9HBU9 364 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PCDH12Q9NPG4 1184 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 WASH6PQ9NQA3 447 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PIGVQ9NUD9 493 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 NKIRAS1Q9NYS0 192 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PSMC3IPQ9P2W1 217 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 ZNF212Q9UDV6 495 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 SEC14L3Q9UDX4 400 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 FETUBQ9UGM5 382 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 RARRES3Q9UL19 164 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 GRID1Q9ULK0 1009 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 STAP1Q9ULZ2 295 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 PCYT1BQ9Y5K3 369 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 HS3ST4Q9Y661 456 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 BIRC6Q9NR09 4857 aa7.07□□□□□ -1.28
CTNNA1-227ENST00000521387 A0A0G2JK05 382 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CCT8L1PA6NM43 557 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CXorf49A8MYA2 514 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 MEN1O00255 615 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 TYROBPO43914 113 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SNX3O60493 162 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 KLF7O75840 302 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 TOXO94900 526 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ASMTLO95671 621 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 POP4O95707 220 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 TPOP07202 933 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 BMP2P12643 396 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ERCC2P18074 760 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 OTX2P32243 289 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 RPA3P35244 121 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 RORAP35398 523 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 FDFT1P37268 417 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 GRIA1P42261 906 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ARCN1P48444 511 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CXCR3P49682 368 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC18A1P54219 525 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC20A2Q08357 652 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 RALGDSQ12967 914 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 TUBB3Q13509 450 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ITIH4Q14624 930 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 KBTBD12Q3ZCT8 623 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 PDLIM3Q53GG5 364 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ATXN7L2Q5T6C5 722 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CGB2Q6NT52 195 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 PNCKQ6P2M8 343 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 PODNL1Q6PEZ8 512 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 PAMR1Q6UXH9 720 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 Q6ZPB1 254 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ARHGEF18Q6ZSZ5 1173 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CCDC121Q6ZUS5 278 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 PRSS42Q7Z5A4 293 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 TECPR1Q7Z6L1 1165 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 YTHDF3Q7Z739 585 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ZSWIM9Q86XI8 627 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms