RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 IQCF5A8MTL0 148 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 E2F3O00716 465 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 RASGRF2O14827 1237 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 DSCR3O14972 297 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 LIASO43766 372 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 FKBP9O95302 570 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 FTCDO95954 541 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 RPN2P04844 631 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 ADRA1DP25100 572 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 COL8A1P27658 744 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 AOAHP28039 575 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 STIP1P31948 543 aaKnown RBP11.3□□□□□ -0.6
POLB-208ENST00000520008 DCTP40126 519 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 ZNF75DP51815 510 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 CSE1LP55060 971 aaKnown RBP11.3□□□□□ -0.6
POLB-208ENST00000520008 HSPA14Q0VDF9 509 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 YOD1Q5VVQ6 348 aaPredicted RBP11.3□□□□□ -0.6
POLB-208ENST00000520008 PRAMEF13Q5VWM6 474 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 KIRREL2Q6UWL6 708 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 SYCE1Q8N0S2 351 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 ZADH2Q8N4Q0 377 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 DNAAF3Q8N9W5 541 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 ST6GALNAC3Q8NDV1 305 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 DENND1AQ8TEH3 1009 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 SLC22A18Q96BI1 424 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 IL17FQ96PD4 163 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 MRM3Q9HC36 420 aaKnown RBP11.3□□□□□ -0.6
POLB-208ENST00000520008 CUTCQ9NTM9 273 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 CTSFQ9UBX1 484 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 CIDEBQ9UHD4 219 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 TCAF1Q9Y4C2 921 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 COPG1Q9Y678 874 aaKnown RBP11.3□□□□□ -0.6
POLB-208ENST00000520008 CAPN6Q9Y6Q1 641 aa11.3□□□□□ -0.6
POLB-208ENST00000520008 F8W8V4 182 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 CTSVO60911 334 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 ALOX12BO75342 701 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 MED26O95402 600 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 ALAS2P22557 587 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 MCM3P25205 808 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 ITGA3P26006 1051 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 FDFT1P37268 417 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 TSFMP43897 325 aaKnown RBP11.29□□□□□ -0.6
POLB-208ENST00000520008 GRM7Q14831 915 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 ZC3H12BQ5HYM0 836 aaKnown RBP11.29□□□□□ -0.6
POLB-208ENST00000520008 TCTE1Q5JU00 501 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 FIGLAQ6QHK4 219 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 NLRP9Q7RTR0 991 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 TAX1BP1Q86VP1 789 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 DTWD1Q8N5C7 304 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 OR11G2Q8NGC1 345 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 HMGCLL1Q8TB92 370 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
POLB-208ENST00000520008 C5orf34Q96MH7 638 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 TTC1Q99614 292 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 TSSK1BQ9BXA7 367 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 P2RY12Q9H244 342 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 IRAK4Q9NWZ3 460 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 MARCH4Q9P2E8 410 aaPredicted RBP11.29□□□□□ -0.6
POLB-208ENST00000520008 NXT1Q9UKK6 140 aaKnown RBP11.29□□□□□ -0.6
POLB-208ENST00000520008 CROCCQ5TZA2 2017 aa11.29□□□□□ -0.6
POLB-208ENST00000520008 ABCA12Q86UK0 2595 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 A0A1W2PPV9 198 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 TARM1B6A8C7 271 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 PRMT5O14744 637 aaPredicted RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 NRP2O60462 931 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 APOA4P06727 396 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 PIM1P11309 404 aaPredicted RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 GRIA3P42263 894 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 PRAMEP78395 509 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 Q0VFX4 171 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 HIF1AQ16665 826 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 FASTKD1Q53R41 847 aaKnown RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 B3GNTL1Q67FW5 361 aaPredicted RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 RNF44Q7L0R7 432 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 PRUNE1Q86TP1 453 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 LDB1Q86U70 411 aaPredicted RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 KCNMB4Q86W47 210 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 TICAM1Q8IUC6 712 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 KRT222Q8N1A0 295 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 C2orf73Q8N5S3 287 aaPredicted RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 OR6P1Q8NGX9 317 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 COG1Q8WTW3 980 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 ZUFSPQ96AP4 578 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 SELENOSQ9BQE4 189 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 MESP1Q9BRJ9 268 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 RAB11FIP5Q9BXF6 653 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 FRMD8P1Q9BZ68 369 aaPredicted RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 INTS7Q9NVH2 962 aaKnown RBP11.28□□□□□ -0.6
POLB-208ENST00000520008 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 LRBAP50851 2863 aa11.28□□□□□ -0.6
POLB-208ENST00000520008 IGLV3-12A0A075B6K2 115 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 A0A1W2PQ72 361 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 KRT87PA6NCN2 255 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 SRPX2O60687 465 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms