RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TEX35Q5T0J7 233 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 UBAP2Q5T6F2 1119 aaKnown RBP21.21■□□□□ 0.99
VEGFA-217ENST00000518538 TMEM207Q6UWW9 146 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 PPP1R3BQ86XI6 285 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 DTX1Q86Y01 620 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 CEP97Q8IW35 865 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 SPACA3Q8IXA5 215 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 NKAPQ8N5F7 415 aaKnown RBP21.21■□□□□ 0.99
VEGFA-217ENST00000518538 OR8K5Q8NH50 307 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 MCOLN3Q8TDD5 553 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 TSPAN17Q96FV3 270 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 TCTN2Q96GX1 697 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 CYTH2Q99418 400 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 SPRY4Q9C004 299 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 CHRNA10Q9GZZ6 450 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 ACSS3Q9H6R3 686 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 PARVBQ9HBI1 364 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 PDE10AQ9Y233 779 aa21.21■□□□□ 0.99
VEGFA-217ENST00000518538 ACACAQ13085 2346 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 A0A1W2PPV9 198 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 ACSL3O95573 720 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 ZNF460Q14592 562 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 USP10Q14694 798 aaKnown RBP21.2■□□□□ 0.98
VEGFA-217ENST00000518538 SF1Q15637 639 aaKnown RBP21.2■□□□□ 0.98
VEGFA-217ENST00000518538 GPR19Q15760 415 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 ZNF480Q8WV37 535 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 SMPDL3AQ92484 453 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 FCRL4Q96PJ5 515 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 FANCEQ9HB96 536 aa21.2■□□□□ 0.98
VEGFA-217ENST00000518538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.2■□□□□ 0.98
VEGFA-217ENST00000518538 TMEM184BQ9Y519 407 aaPredicted RBP21.2■□□□□ 0.98
VEGFA-217ENST00000518538 KLK10O43240 276 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 FAM155BO75949 473 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 STK17BO94768 372 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 MAGP20916 626 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 PSMB5P28074 263 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 ZIC1Q15915 447 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 CDHR3Q6ZTQ4 885 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 FAM20CQ8IXL6 584 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 EIF1ADQ8N9N8 165 aaKnown RBP21.19■□□□□ 0.98
VEGFA-217ENST00000518538 ANKRD7Q92527 254 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 ZNF501Q96CX3 271 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-217ENST00000518538 CCDC138Q96M89 665 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 ULBP3Q9BZM4 244 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 CAB39LQ9H9S4 337 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 GPAMQ9HCL2 828 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 INTS7Q9NVH2 962 aaKnown RBP21.19■□□□□ 0.98
VEGFA-217ENST00000518538 PILRAQ9UKJ1 303 aa21.19■□□□□ 0.98
VEGFA-217ENST00000518538 WISP3O95389 354 aaPredicted RBP21.18■□□□□ 0.98
VEGFA-217ENST00000518538 STMN1P16949 149 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 ITPKBP27987 946 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 IMPA1P29218 277 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 TLE3Q04726 772 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 TGIF1Q15583 401 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 ZKSCAN8Q15776 578 aaPredicted RBP21.18■□□□□ 0.98
VEGFA-217ENST00000518538 PHKG1Q16816 387 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 SYTL1Q8IYJ3 562 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 OR2L3Q8NG85 312 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 OR2A1Q8NGT9 310 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 FAM60AQ9NP50 221 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 SSUH2Q9Y2M2 353 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 DMXL2Q8TDJ6 3036 aa21.18■□□□□ 0.98
VEGFA-217ENST00000518538 URB1O60287 2271 aaKnown RBP21.17■□□□□ 0.98
VEGFA-217ENST00000518538 E7ENX8 843 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 RAD1O60671 282 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 TIAF1O95411 115 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 DLGAP3O95886 979 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 ENO2P09104 434 aaPredicted RBP21.17■□□□□ 0.98
VEGFA-217ENST00000518538 HIST1H2AGP0C0S8 130 aaPredicted RBP21.17■□□□□ 0.98
VEGFA-217ENST00000518538 ZNF28P17035 718 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 HIST1H2ADP20671 130 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 RPA3P35244 121 aaPredicted RBP21.17■□□□□ 0.98
VEGFA-217ENST00000518538 ATP1A2P50993 1020 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 TAP2Q03519 686 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 MAP7Q14244 749 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 BROXQ5VW32 411 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 KIAA1614Q5VZ46 1190 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 PWWP2BQ6NUJ5 590 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 SUSD1Q6UWL2 747 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 LRRC56Q8IYG6 542 aaPredicted RBP21.17■□□□□ 0.98
VEGFA-217ENST00000518538 PPFIBP2Q8ND30 876 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 ANKRD49Q8WVL7 239 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 HIST1H2AHQ96KK5 128 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 MIPEPQ99797 713 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 HIST1H2AJQ99878 128 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 H2AFJQ9BTM1 129 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 TRIM54Q9BYV2 358 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 STOX2Q9P2F5 926 aaPredicted RBP21.17■□□□□ 0.98
VEGFA-217ENST00000518538 IKZF3Q9UKT9 509 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 NOVA2Q9UNW9 492 aaKnown RBP21.17■□□□□ 0.98
VEGFA-217ENST00000518538 KLHL20Q9Y2M5 609 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 KLK4Q9Y5K2 254 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 SDK2Q58EX2 2172 aa21.17■□□□□ 0.98
VEGFA-217ENST00000518538 PABPN1LA6NDY0 278 aaKnown RBP21.16■□□□□ 0.98
VEGFA-217ENST00000518538 TMEM150CB9EJG8 249 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 PHGDHO43175 533 aaKnown RBP21.16■□□□□ 0.98
VEGFA-217ENST00000518538 KIAA0754O94854 1291 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 CMPK1P30085 196 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 GABRA4P48169 554 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 AP1S2P56377 157 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms