RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 HSPA8P11142 646 aaKnown RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 FCGR1AP12314 374 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ZNF12P17014 697 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 AZGP1P25311 298 aaKnown RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ELAVL4P26378 380 aaKnown RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 CD86P42081 329 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 GLIPR1P48060 266 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 NR2C2P49116 596 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 PDX1P52945 283 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 SLC12A3P55017 1021 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 C21orf58P58505 322 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 TUBA1BP68363 451 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 PITX1P78337 314 aaPredicted RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 RPL24P83731 157 aaKnown RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 KLC1Q07866 573 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 CBX3Q13185 183 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 KIR2DS3Q14952 304 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 PPA1Q15181 289 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 STXBP2Q15833 593 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ETFDHQ16134 617 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 SGCBQ16585 318 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 DUOXA1Q1HG43 343 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 CTU2Q2VPK5 515 aaKnown RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 MCMDC2Q4G0Z9 681 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 CCDC158Q5M9N0 1113 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 SPDYCQ5MJ68 293 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ZNF770Q6IQ21 691 aaPredicted RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 CYB5D1Q6P9G0 228 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 RHBDF2Q6PJF5 856 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 PRSS55Q6UWB4 352 aaPredicted RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 FAM43BQ6ZT52 329 aaPredicted RBP3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ARHGAP22Q7Z5H3 698 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 SATL1Q86VE3 508 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 LONP2Q86WA8 852 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 AMIGO1Q86WK6 493 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 COMMD2Q86X83 199 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 FAM114A1Q8IWE2 563 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 DNAJC10Q8IXB1 793 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ODF3L1Q8IXM7 274 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 PEX5LQ8IYB4 626 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ANKRD13CQ8N6S4 541 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 KCNH5Q8NCM2 988 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ELP5Q8TE02 316 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 RSPH1Q8WYR4 309 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 IRGQQ8WZA9 623 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 FIG4Q92562 907 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 SGF29Q96ES7 293 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 HMCESQ96FZ2 354 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 BICD1Q96G01 975 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 C5orf30Q96GV9 206 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 GAL3ST4Q96RP7 486 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ACTL8Q9H568 366 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 UBTD1Q9HAC8 227 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 TCF7L2Q9NQB0 619 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ANO10Q9NW15 660 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ELOVL5Q9NYP7 299 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 TRIM10Q9UDY6 481 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 FBXW2Q9UKT8 454 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 STX8Q9UNK0 236 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 WDR83OSQ9Y284 106 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 ACEP12821 1306 aa3.12□□□□□ -1.91
RNU6-840P-201ENST00000517275 COL3A1P02461 1466 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 TRBV2A0A0J9YWF9 115 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 A0A1W2PPW3 197 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 A0A1W2PRB8 838 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 RTCAO00442 366 aaKnown RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 ARPC2O15144 300 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 PPFIA2O75334 1257 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 RAD51DO75771 328 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 BCAS2O75934 225 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 MOCS2O96007 188 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 GSRP00390 522 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 ACP2P11117 423 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 LBPP18428 481 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 GNL1P36915 607 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 PSMC4P43686 418 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 VAMP7P51809 220 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 THOP1P52888 689 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 IL1RL1Q01638 556 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 FOLH1Q04609 750 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 KIF5AQ12840 1032 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 PRKAA1Q13131 559 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 CYP4A22Q5TCH4 519 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 OR7E24Q6IFN5 339 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 ETFRF1Q6IPR1 90 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 PODNL1Q6PEZ8 512 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 CATSPER4Q7RTX7 472 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 PRSS42Q7Z5A4 293 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 MEX3DQ86XN8 651 aaKnown RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 FOXP4Q8IVH2 680 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 MMD2Q8IY49 270 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 SFRP1Q8N474 314 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 SLC26A7Q8TE54 656 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 SLC13A3Q8WWT9 602 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 BSCL2Q96G97 398 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 OXNAD1Q96HP4 312 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 FAM71F1Q96KD3 344 aaPredicted RBP3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 FAM20AQ96MK3 541 aa3.11□□□□□ -1.91
RNU6-840P-201ENST00000517275 C17orf77Q96MU5 243 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms