RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 DDHD2O94830 711 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 ANGP03950 147 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 H1F0P07305 194 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CT47B1P0C2W7 299 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 DANCRP0C864 163 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 P0C880 135 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PF4V1P10720 104 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 MYL4P12829 197 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CHN1P15882 459 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 EFNA1P20827 205 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 FUT3P21217 361 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TNFAIP3P21580 790 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TNFRSF4P43489 277 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 KIR2DS2P43631 304 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 BRCC3P46736 316 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 RPS9P46781 194 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 NDST1P52848 882 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PNLIPRP1P54315 467 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 HMGCS2P54868 508 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 ALDH18A1P54886 795 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 ACTA1P68133 377 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 GCNT1Q02742 428 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 BTKQ06187 659 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 ITKQ08881 620 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PDCLQ13371 301 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 GALEQ14376 348 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 GGTLC2Q14390 218 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 HERPUD1Q15011 391 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 RPS6KA2Q15349 733 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 IL17AQ16552 155 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZNF674Q2M3X9 581 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TRIM60Q495X7 471 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LINC00483Q53H64 154 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 NHSL2Q5HYW2 709 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TMCO4Q5TGY1 634 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 GARNL3Q5VVW2 1013 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SIGIRRQ6IA17 410 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LCN10Q6JVE6 187 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PAPD4Q6PIY7 484 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TMEM207Q6UWW9 146 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 C17orf99Q6UX52 265 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PQLC2Q6ZP29 291 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LINGO2Q7L985 606 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PRSS45Q7RTY3 260 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PIWIL3Q7Z3Z3 882 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CPEB2Q7Z5Q1 589 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TMEM25Q86YD3 366 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LRRC49Q8IUZ0 686 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CROCCP3Q8IVE0 287 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TPH2Q8IWU9 490 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 GPALPP1Q8IXQ4 340 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SAXO1Q8IYX7 474 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CDK20Q8IZL9 346 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CARNMT1Q8N4J0 409 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SLC5A8Q8N695 610 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 RNF149Q8NC42 400 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 HJURPQ8NCD3 748 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 OR13C3Q8NGS6 347 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 OR1L3Q8NH93 324 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 HUS1BQ8NHY5 278 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SLC35G2Q8TBE7 412 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 KCNE4Q8WWG9 221 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LRTOMTQ8WZ04 291 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 APBB2Q92870 758 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PABPC5Q96DU9 382 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 VSIG2Q96IQ7 327 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LRGUKQ96M69 825 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 MCCC1Q96RQ3 725 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SPIN2AQ99865 258 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SPIN2BQ9BPZ2 258 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 PAXXQ9BUH6 204 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 APOL5Q9BWW9 433 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 C1QTNF1Q9BXJ1 281 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 NMNAT2Q9BZQ4 307 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 USP44Q9H0E7 712 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 TMEM60Q9H2L4 133 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 HELLSQ9NRZ9 838 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 NPAP1Q9NZP6 1156 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 ABI3Q9P2A4 366 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 FRMD4AQ9P2Q2 1039 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 MYO1AQ9UBC5 1043 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 DDX20Q9UHI6 824 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 OPN4Q9UHM6 478 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CRLS1Q9UJA2 301 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 ITGA11Q9UKX5 1188 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CORO2BQ9UQ03 480 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 B3GALT5Q9Y2C3 310 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 MAN2B2Q9Y2E5 1009 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 CARD8Q9Y2G2 431 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LUC7L2Q9Y383 392 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LSM4Q9Y4Z0 139 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LRP1Q07954 4544 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SHROOM3Q8TF72 1996 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 NAV2Q8IVL1 2488 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 BAHCC1Q9P281 2608 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 VWDEQ8N2E2 1590 aa-0.39□□□□□ -2.47
SNORA40.17-201ENST00000517256 MUC2Q02817 5179 aa-0.39□□□□□ -2.47
SNORA40.17-201ENST00000517256 SVILO95425 2214 aa-0.39□□□□□ -2.47
SNORA40.17-201ENST00000517256 TRAV40A0A0B4J280 105 aa-0.39□□□□□ -2.47
SNORA40.17-201ENST00000517256 A0A1W2PRB8 838 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms