RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PLXNB3Q9ULL4 1909 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PRAMEF33A0A0G2JMD5 474 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 A0A0J9YY10 115 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HMX2A2RU54 273 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TLCD2A6NGC4 264 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HMGB1P1B2RPK0 211 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 UBXN8O00124 270 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 AGRPO00253 132 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TOX3O15405 576 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ATP8B1O43520 1251 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CSO75390 466 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SPAG7O75391 227 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KATNA1O75449 491 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZWINTO95229 277 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZBTB11O95625 1053 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TSPAN12O95859 305 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SLC16A8O95907 504 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 JMJD7P0C870 316 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CPA3P15088 417 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 EPB42P16452 691 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 UGT2B7P16662 529 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GNAZP19086 355 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ATP5F1P24539 256 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CXCR2P25025 360 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MPSTP25325 297 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GCAP28676 217 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CD1CP29017 333 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RBMS1P29558 406 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PRDX3P30048 256 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SEPHS1P49903 392 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CCR8P51685 355 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PRKAA2P54646 552 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ALDH18A1P54886 795 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MAGOHP61326 146 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NAA20P61599 178 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PHEXP78562 749 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HSD11B2P80365 405 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TIAL1Q01085 375 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ACY1Q03154 408 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FOXM1Q08050 763 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FOXC1Q12948 553 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NR1D2Q14995 579 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RBBP7Q16576 425 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CYP2A13Q16696 494 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PHKG1Q16816 387 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SLC5A12Q1EHB4 618 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CCSMST1Q4G0I0 132 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZC3H12BQ5HYM0 836 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PAGE2BQ5JRK9 111 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 N4BP2L1Q5TBK1 243 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HES3Q5TGS1 186 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 AGBL2Q5U5Z8 902 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PRAMEF13Q5VWM6 474 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 C16orf46Q6P387 395 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SPESP1Q6UW49 350 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SUSD1Q6UWL2 747 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMEM207Q6UWW9 146 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TRABD2AQ86V40 505 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FAM129CQ86XR2 697 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KMT5CQ86Y97 462 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MYLK4Q86YV6 388 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HOMEZQ8IX15 550 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GPR135Q8IZ08 494 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CYP4X1Q8N118 509 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KRT78Q8N1N4 520 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZNF655Q8N720 491 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CCNYL1Q8N7R7 359 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PTGR2Q8N8N7 351 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ANKRD42Q8N9B4 389 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PPFIBP2Q8ND30 876 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 AGBL5Q8NDL9 886 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 BAHD1Q8TBE0 780 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZNF480Q8WV37 535 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RSC1A1Q92681 617 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ISL2Q96A47 359 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RERGQ96A58 199 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PHF21BQ96EK2 531 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TCTN2Q96GX1 697 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CCDC74BQ96LY2 380 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NUDT22Q9BRQ3 303 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ACAT2Q9BWD1 397 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NLNQ9BYT8 704 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CD244Q9BZW8 370 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RAB33BQ9H082 229 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SEMA6CQ9H3T2 930 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMBIM4Q9HC24 238 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 C1GALT1Q9NS00 363 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 IGSF5Q9NSI5 407 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 DNAJC11Q9NVH1 559 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 STOX2Q9P2F5 926 aaPredicted RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 XPR1Q9UBH6 696 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 EPHA6Q9UF33 1036 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TAC3Q9UHF0 121 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SERTAD3Q9UJW9 196 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 STK38LQ9Y2H1 464 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ACTL7BQ9Y614 415 aa5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TDRD6O60522 2096 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMEM131Q92545 1883 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms