RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZNF74Q16587 644 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 HYIQ5T013 277 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 TMEM198Q66K66 360 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 IL20RBQ6UXL0 311 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 IL34Q6ZMJ4 242 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 ZNF600Q6ZNG1 722 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 PAF1Q8N7H5 531 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 HJURPQ8NCD3 748 aaPredicted RBP-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 CCDC150Q8NCX0 1101 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 ATL2Q8NHH9 583 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 HUS1BQ8NHY5 278 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 POF1BQ8WVV4 589 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 DNAAF4Q8WXU2 420 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 SPAG5Q96R06 1193 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 TAAR9Q96RI9 348 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 MCCC1Q96RQ3 725 aaPredicted RBP-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 SIN3AQ96ST3 1273 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 HERC2P3Q9BVR0 1158 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 RGL1Q9NZL6 768 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 CTNNAL1Q9UBT7 734 aa-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 LEF1Q9UJU2 399 aaPredicted RBP-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 LSM4Q9Y4Z0 139 aaKnown RBP-1.32□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGLV2-33A0A075B6J2 118 aaPredicted RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 MGEA5O60502 916 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 WDHD1O75717 1129 aaPredicted RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 METTL18O95568 372 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 MRPL3P09001 348 aaKnown RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 HOXB7P09629 217 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 EEF2P13639 858 aaKnown RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 CCND1P24385 295 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 HRH2P25021 359 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 TECP42680 631 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 IER3P46695 156 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 NDST1P52848 882 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 RPS18P62269 152 aaKnown RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 SRPXP78539 464 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 PRKCEQ02156 737 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 SNTB1Q13884 538 aaKnown RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 TAB1Q15750 504 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 TOR1AIP1Q5JTV8 583 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 TMEM240Q5SV17 173 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 LCN10Q6JVE6 187 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 HCP5Q6MZN7 132 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 PQLC2Q6ZP29 291 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 LINC01551Q86U37 167 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 LRRC49Q8IUZ0 686 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 C1orf52Q8N6N3 182 aaKnown RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 NCSTNQ92542 709 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 DNAJA3Q96EY1 480 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 PIGSQ96S52 555 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 PLEKHF1Q96S99 279 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 DDX24Q9GZR7 859 aaKnown RBP eCLIP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 CTDSP1Q9GZU7 261 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 MTMR6Q9Y217 621 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 CARD8Q9Y2G2 431 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 PCDHGB2Q9Y5G2 931 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 CYP46A1Q9Y6A2 500 aa-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 RAI1Q7Z5J4 1906 aaPredicted RBP-1.33□□□□□ -2.62
RNU6-539P-201ENST00000516665 STAB1Q9NY15 2570 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGKV2-24A0A0C4DH68 120 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 MUC21A0A0G2JKD1 596 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 MUC21A0A140T8X8 626 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 VGLL3A8MV65 326 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 F8VVB4 439 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 F8VWA3 439 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 TMX2-CTNND1H3BSU7 103 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 VCYO14598 125 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 GPC4O75487 556 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 SKAP2O75563 359 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 TRUB2O95900 331 aaKnown RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGHV4-31P0DP07 118 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 SLC2A4P14672 509 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 IDEP14735 1019 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 WARSP23381 471 aaKnown RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 MAGEB1P43366 347 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 CAV2P51636 162 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 NDST2P52849 883 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 LBX1P52954 281 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 SLC25A1P53007 311 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 RPS3AP61247 264 aaKnown RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 TNK1Q13470 666 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 MADCAM1Q13477 382 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 SLC18A3Q16572 532 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 BTBD16Q32M84 506 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 RUNDC3AQ59EK9 446 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 MUC21Q5SSG8 566 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 IFIT1BQ5T764 474 aaKnown RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 KLHDC7AQ5VTJ3 777 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 AGAP6Q5VW22 663 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 EPM2AIP1Q7L775 607 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 ZNF677Q86XU0 584 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 ARHGAP12Q8IWW6 846 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 KIAA0319LQ8IZA0 1049 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 USP38Q8NB14 1042 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 OR2L8Q8NGY9 312 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 STRBPQ96SI9 672 aaKnown RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 NKX3-1Q99801 234 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 NMUR2Q9GZQ4 415 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 MTHFD2LQ9H903 347 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 LNPEPQ9UIQ6 1025 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms