RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PDX1P52945 283 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 PRKAA2P54646 552 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 POU4F1Q01851 419 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 ABRQ12979 859 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 BNIP1Q12981 228 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 PCLAFQ15004 111 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 FAM47EQ6ZV65 393 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 RAB11FIP2Q7L804 512 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 ARHGAP22Q7Z5H3 698 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 NUDCD3Q8IVD9 361 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 TBC1D21Q8IYX1 336 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 SLC22A15Q8IZD6 547 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 FITM2Q8N6M3 262 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 ARMC2Q8NEN0 867 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 ACVR1CQ8NER5 493 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 OR4E2Q8NGC2 313 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 LKAAEAR1Q8TD35 194 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 LCN9Q8WX39 176 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 NXPE2Q96DL1 559 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 PRR11Q96HE9 360 aaPredicted RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 SLC46A1Q96NT5 459 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 GPR78Q96P69 363 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 CMKLR1Q99788 373 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 RAB33BQ9H082 229 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 ZMYND15Q9H091 742 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 TRIT1Q9H3H1 467 aaKnown RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 KIR3DX1Q9H7L2 352 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 KCNK13Q9HB14 408 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 FBXO6Q9NRD1 293 aaPredicted RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 ABCF3Q9NUQ8 709 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 THAP1Q9NVV9 213 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 HRASLS2Q9NWW9 162 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 TMEM216Q9P0N5 145 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 COPG2Q9UBF2 871 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 POLG2Q9UHN1 485 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 HAO1Q9UJM8 370 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 SATB2Q9UPW6 733 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 CDYLQ9Y232 598 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 ASF1AQ9Y294 204 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 PCDHGA8Q9Y5G5 932 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 SPEGQ15772 3267 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 IGF2RP11717 2491 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 A0A087X1B8 175 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 A0A1W2PNU3 283 aaPredicted RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 A8MU76 341 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 E5RI56 91 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 CAPN5O15484 640 aaPredicted RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 KDM1AO60341 852 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 NIPSNAP2O75323 286 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 H2AFYO75367 372 aaKnown RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 DXOO77932 396 aaKnown RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 SNUPNO95149 360 aaKnown RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 TNFSF15O95150 251 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 C9P02748 559 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 SERPINE1P05121 402 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 THRAP10827 490 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 ALOX15P16050 662 aaPredicted RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 BGNP21810 368 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 CD9P21926 228 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 ALDH3A1P30838 453 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 CSF2RBP32927 897 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 MLLT3P42568 568 aaPredicted RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 CAPZBP47756 277 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 SCTRP47872 440 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 RAB10P61026 200 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 GABREP78334 506 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 MPP1Q00013 466 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 BST1Q10588 318 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 PRKAA1Q13131 559 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 PRKG2Q13237 762 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 C16orf72Q14CZ0 275 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 PLCL1Q15111 1095 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 SPRED3Q2MJR0 410 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 TTLL9Q3SXZ7 439 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 C3orf38Q5JPI3 329 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 SNAP47Q5SQN1 464 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 UGT3A1Q6NUS8 523 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 ARMC6Q6NXE6 501 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 DUS1LQ6P1R4 473 aaKnown RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 ZNF549Q6P9A3 640 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 TTC23LQ6PF05 361 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 CNSTQ6PJW8 725 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 IGF2-ASQ6U949 168 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 UNC5DQ6UXZ4 953 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 CMC1Q7Z7K0 106 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 OOSP2Q86WS3 158 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 VRK3Q8IV63 474 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 CENPLQ8N0S6 344 aaPredicted RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 PLD6Q8N2A8 252 aaKnown RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 ZBTB2Q8N680 514 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 AGBL5Q8NDL9 886 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 OR52E1Q8NGJ3 308 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 OR5K2Q8NHB8 316 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 CFAP61Q8NHU2 1237 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 JPH3Q8WXH2 748 aaPredicted RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 KCNJ9Q92806 393 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 UBXN10Q96LJ8 280 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms