RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TRHDEQ9UKU6 1024 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 VANGL2Q9ULK5 521 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 OR5K3A6NET4 321 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CENPBD1B2RD01 187 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZBTB24O43167 697 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SMAD6O43541 496 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 HCRTO43612 131 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ATG13O75143 517 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 OR4F21O95013 312 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CLIC3O95833 236 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 FCGR1AP12314 374 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 NCF2P19878 526 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CCR2P41597 374 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 TNFRSF4P43489 277 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CXCR3P49682 368 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 GSK3BP49841 420 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SEPHS1P49903 392 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 RENBPP51606 427 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PPP5CP53041 499 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 NAGLUP54802 743 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 GNA12Q03113 381 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 VAC14Q08AM6 782 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SMU1Q2TAY7 513 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF789Q5FWF6 425 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CERCAMQ5T4B2 595 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 OR4F3Q6IEY1 312 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 UGT3A1Q6NUS8 523 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 FAHD1Q6P587 224 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZBTB49Q6ZSB9 765 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 R3HCC1LQ7Z5L2 792 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SLC44A3Q8N4M1 653 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF486Q96H40 463 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 MRGPRX2Q96LB1 330 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 VAT1Q99536 393 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 FAM83CQ9BQN1 747 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 NOL6Q9H6R4 1146 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 BRD9Q9H8M2 597 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 FANCEQ9HB96 536 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 LTB4R2Q9NPC1 389 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PIGVQ9NUD9 493 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ATAD3AQ9NVI7 634 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CCDC59Q9P031 241 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CRNNQ9UBG3 495 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 NDUFAF1Q9Y375 327 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CEP290O15078 2479 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 COL4A3Q01955 1670 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 A0A0B4J293 547 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 TRIM77I1YAP6 450 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SLC1A7O00341 560 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 KDM1AO60341 852 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 MAFKO60675 156 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 TULP3O75386 442 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PTTG1O95997 202 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 RFX2P48378 723 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 SLC7A2P52569 658 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CYP4F8P98187 520 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 FASTKQ14296 549 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 MAPRE2Q15555 327 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 MLF2Q15773 248 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ATAD3BQ5T9A4 648 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 VITQ6UXI7 678 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PIWIL3Q7Z3Z3 882 aaKnown RBP7.24□□□□□ -1.25
CLIP1-205ENST00000514271 GLRX5Q86SX6 157 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 ZFAND4Q86XD8 727 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 NDNFQ8TB73 568 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PROKR1Q8TCW9 393 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 S100ZQ8WXG8 99 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 BIRC7Q96CA5 298 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 RNF31Q96EP0 1072 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 CALN1Q9BXU9 219 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 GABARAPL3Q9BY60 117 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 FZD3Q9NPG1 666 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PFDN2Q9UHV9 154 aa7.24□□□□□ -1.25
CLIP1-205ENST00000514271 PRRC2BQ5JSZ5 2229 aaKnown RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 A0A0X1KG70 313 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 GFRA2O00451 464 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 KPNA4O00629 521 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 ACSL4O60488 711 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 SLC15A1P46059 708 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 CDKN2DP55273 166 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 CDH13P55290 713 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 C21orf58P58505 322 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 GALK2Q01415 458 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 RUNX3Q13761 415 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 GRB7Q14451 532 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 TTC23LQ6PF05 361 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 GPRIN1Q7Z2K8 1008 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 B3GNT8Q7Z7M8 397 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 ATCAYQ86WG3 371 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 PCDH20Q8N6Y1 951 aaKnown RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 FAM86B1Q8N7N1 296 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 PEX13Q92968 403 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 FAM149B1Q96BN6 582 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 TCEAL4Q96EI5 215 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 PAIP1Q9H074 479 aaKnown RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 CAAP1Q9H8G2 361 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 POLR1BQ9H9Y6 1135 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 AASDHPPTQ9NRN7 309 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 VNN3Q9NY84 501 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 NDOR1Q9UHB4 597 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms