RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 STAT2P52630 851 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 MAT1AQ00266 395 aaKnown RBP4.32□□□□□ -1.72
PDE4D-221ENST00000514231 FASTKD3Q14CZ7 662 aaKnown RBP4.32□□□□□ -1.72
PDE4D-221ENST00000514231 LCN1P1Q5VSP4 162 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 TMEM207Q6UWW9 146 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 BTN2A1Q7KYR7 527 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 G2E3Q7L622 706 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 ZNF519Q8TB69 540 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 SMAP2Q8WU79 429 aaPredicted RBP4.32□□□□□ -1.72
PDE4D-221ENST00000514231 LPGAT1Q92604 370 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 SLAMF9Q96A28 289 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 NSUN4Q96CB9 384 aaKnown RBP4.32□□□□□ -1.72
PDE4D-221ENST00000514231 ARSGQ96EG1 525 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 OPA3Q9H6K4 179 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 GKN1Q9NS71 199 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 GIMAP4Q9NUV9 329 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 DPP3Q9NY33 737 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 NUDT4Q9NZJ9 180 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 STK26Q9P289 416 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 THEGQ9P2T0 379 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 PPP2R2CQ9Y2T4 447 aa4.32□□□□□ -1.72
PDE4D-221ENST00000514231 FSD2A1L4K1 749 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 SEC24AO95486 1093 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 SMIM18P0DKX4 95 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 PAX3P23760 479 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 CSTF2P33240 577 aaKnown RBP eCLIP4.31□□□□□ -1.721e-7■■■■□ 21.3
PDE4D-221ENST00000514231 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 LMOD3Q0VAK6 560 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 CHAF1BQ13112 559 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 RIGQ13278 110 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 SLC35D3Q5M8T2 416 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 C11orf63Q6NUN7 778 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.31□□□□□ -1.72
PDE4D-221ENST00000514231 GPRC5AQ8NFJ5 357 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 OR10S1Q8NGN2 331 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 OR1L3Q8NH93 324 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 MAPK15Q8TD08 544 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 SPACA9Q96E40 222 aaPredicted RBP4.31□□□□□ -1.72
PDE4D-221ENST00000514231 THAP2Q9H0W7 228 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 Q9N2K0 584 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 FAM207AQ9NSI2 230 aaPredicted RBP4.31□□□□□ -1.72
PDE4D-221ENST00000514231 STUB1Q9UNE7 303 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 TNNQ9UQP3 1299 aa4.31□□□□□ -1.72
PDE4D-221ENST00000514231 IGHV3OR16-10A0A075B7F0 116 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 TOMM70O94826 608 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 DDHD2O94830 711 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 IGHV2-70P01814 119 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 ALOX12P18054 663 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 PRKACGP22612 351 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
PDE4D-221ENST00000514231 MS4A2Q01362 244 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 GCNT1Q02742 428 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 CALCOCO2Q13137 446 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 BAATQ14032 418 aaPredicted RBP4.3□□□□□ -1.72
PDE4D-221ENST00000514231 WTAPQ15007 396 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 NTRK2Q16620 822 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 CA9Q16790 459 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 UGT3A2Q3SY77 523 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 FAM205BPQ63HN1 556 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 TMEM211Q6ICI0 200 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 TMPRSS11BQ86T26 416 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 CDC20BQ86Y33 519 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 LMNTD2Q8IXW0 634 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 GATAD1Q8WUU5 269 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 ZNF622Q969S3 477 aaKnown RBP eCLIP4.3□□□□□ -1.72
PDE4D-221ENST00000514231 CENPTQ96BT3 561 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 SFXN2Q96NB2 322 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 NECTIN4Q96NY8 510 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 NKX3-1Q99801 234 aaPredicted RBP4.3□□□□□ -1.72
PDE4D-221ENST00000514231 PANK3Q9H999 370 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 SLC35C2Q9NQQ7 365 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 SPHK2Q9NRA0 654 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 BLOC1S4Q9NUP1 217 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 VPS28Q9UK41 221 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 MAN1B1Q9UKM7 699 aa4.3□□□□□ -1.72
PDE4D-221ENST00000514231 TDRD15B5MCY1 1934 aaKnown RBP4.29□□□□□ -1.72
PDE4D-221ENST00000514231 MEIS2O14770 477 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 IPO8O15397 1037 aaKnown RBP4.29□□□□□ -1.72
PDE4D-221ENST00000514231 IDH3BO43837 385 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
PDE4D-221ENST00000514231 JAK1P23458 1154 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 PTGER3P43115 390 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 MATR3P43243 847 aaKnown RBP eCLIP4.29□□□□□ -1.722e-6■■■■□ 20.9
PDE4D-221ENST00000514231 PGFP49763 221 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 CDH13P55290 713 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 TMEM50BP56557 158 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 MTHFSDQ2M296 383 aaKnown RBP4.29□□□□□ -1.72
PDE4D-221ENST00000514231 CBWD6Q4V339 395 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 CBWD3Q5JTY5 395 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 UGT3A1Q6NUS8 523 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 FAM198BQ6UWH4 519 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 GPRIN3Q6ZVF9 776 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 TAGAPQ8N103 731 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 Q8N377 158 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 MINDY1Q8N5J2 469 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 NUP37Q8NFH4 326 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 OR6S1Q8NH40 331 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 SLC22A18Q96BI1 424 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 EVI5LQ96CN4 794 aa4.29□□□□□ -1.72
PDE4D-221ENST00000514231 MRPL1Q9BYD6 325 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms