RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 IYDQ6PHW0 289 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 SLC30A9Q6PML9 568 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 C11orf74Q86VG3 221 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 SFTPA2Q8IWL1 248 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 KIRREL3Q8IZU9 778 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 DCBLD1Q8N8Z6 715 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 L3MBTL4Q8NA19 623 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 LINC01555Q8NAE3 123 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 HMGCLL1Q8TB92 370 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 WDR34Q96EX3 536 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 PRR11Q96HE9 360 aaPredicted RBP9.06□□□□□ -0.96
DHFR-206ENST00000513048 ZC3H10Q96K80 434 aaKnown RBP9.06□□□□□ -0.96
DHFR-206ENST00000513048 C3orf30Q96M34 536 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 OR52B2Q96RD2 323 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 FERD3LQ96RJ6 166 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 NUSAP1Q9BXS6 441 aaKnown RBP9.06□□□□□ -0.96
DHFR-206ENST00000513048 GSDMCQ9BYG8 508 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 NUF2Q9BZD4 464 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 MYLK2Q9H1R3 596 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 WDR55Q9H6Y2 383 aaPredicted RBP9.06□□□□□ -0.96
DHFR-206ENST00000513048 KIR3DX1Q9H7L2 352 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 MEAF6Q9HAF1 191 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 ABCF3Q9NUQ8 709 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 TMEM74BQ9NUR3 256 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 IMP3Q9NV31 184 aaKnown RBP9.06□□□□□ -0.96
DHFR-206ENST00000513048 TRPS1Q9UHF7 1281 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 POLG2Q9UHN1 485 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 ICKQ9UPZ9 632 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 SH2B3Q9UQQ2 575 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 TIMM22Q9Y584 194 aa9.06□□□□□ -0.96
DHFR-206ENST00000513048 A0A1B0GVT2 93 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 PABPN1LA6NDY0 278 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 TRPC5OSA6NMA1 111 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 PRICKLE3O43900 615 aaPredicted RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 SKAP2O75563 359 aaPredicted RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 ENO1P06733 434 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 CAPN1P07384 714 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 SP9P0CG40 484 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 UROSP10746 265 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 NPPBP16860 134 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CD22P20273 847 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 AVPR2P30518 371 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 HSD17B2P37059 387 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 HALP42357 657 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CASP2P42575 452 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CTSKP43235 329 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 HTR6P50406 440 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 BLKP51451 505 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 AFF3P51826 1226 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 CCNG1P51959 295 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 UBE2IP63279 158 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 CDC16Q13042 620 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 C1orf61Q13536 156 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 XKR7Q5GH72 579 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 TCHHL1Q5QJ38 904 aaPredicted RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 CAPN13Q6MZZ7 669 aaPredicted RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 SLCO4C1Q6ZQN7 724 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 RNF165Q6ZSG1 346 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 MILR1Q7Z6M3 343 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 ALYREFQ86V81 257 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 SYTL1Q8IYJ3 562 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 NAGSQ8N159 534 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CHCHD4Q8N4Q1 142 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 FITM2Q8N6M3 262 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CDYL2Q8N8U2 506 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 SNX31Q8N9S9 440 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 ZBTB44Q8NCP5 570 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 OR52E1Q8NGJ3 308 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 OR2L8Q8NGY9 312 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 SETD7Q8WTS6 366 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 TWIST2Q8WVJ9 160 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 PATE1Q8WXA2 126 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 MED8Q96G25 268 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 PLCD4Q9BRC7 762 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CCDC28BQ9BUN5 200 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 SLC29A3Q9BZD2 475 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 ZNF385DQ9H6B1 395 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 C11orf16Q9NQ32 467 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 GPRC5BQ9NZH0 403 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 HEY2Q9UBP5 337 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 APOBEC3BQ9UH17 382 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 PILRBQ9UKJ0 227 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 APOBEC2Q9Y235 224 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 TDRKHQ9Y2W6 561 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 RNF11Q9Y3C5 154 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 FIS1Q9Y3D6 152 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CCL27Q9Y4X3 112 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 ANGPTL3Q9Y5C1 460 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 PTGDR2Q9Y5Y4 395 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 HEBP2Q9Y5Z4 205 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 CACNA1EQ15878 2313 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 PCM1Q15154 2024 aa9.05□□□□□ -0.96
DHFR-206ENST00000513048 ATXN2Q99700 1313 aaKnown RBP9.05□□□□□ -0.96
DHFR-206ENST00000513048 TMEM131Q92545 1883 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 GOLGA8QA0A0J9YX86 632 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 A0A1B0GTW7 788 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 GOLGA8OA6NCC3 632 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 CCT8L1PA6NM43 557 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 E7EQ34 232 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 GOLGA8NF8WBI6 632 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms