RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 TLDC1Q6P9B6 456 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 IGDCC3Q8IVU1 814 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 DSELQ8IZU8 1212 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 LMNTD1Q8N9Z9 388 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 HMGCLL1Q8TB92 370 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 SLC30A3Q99726 388 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 TWSG1Q9GZX9 223 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 CHST8Q9H2A9 424 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 AKIRIN1Q9H9L7 192 aaPredicted RBP16.24■□□□□ 0.19
SMN2-210ENST00000511812 TAS2R13Q9NYV9 303 aa16.24■□□□□ 0.19
SMN2-210ENST00000511812 CDC14CA4D256 554 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 ARHGEF33A8MVX0 844 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 EIF3FO00303 357 aaPredicted RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 TERTO14746 1132 aaKnown RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 SYF2O95926 243 aaKnown RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 FAM87AP0C7U9 286 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 PTPN4P29074 926 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 RPL21P46778 160 aaKnown RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 RGS4P49798 205 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 C2orf54Q08AI8 447 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 TSTA3Q13630 321 aaPredicted RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 NAA25Q14CX7 972 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 CYP2A13Q16696 494 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 ZC3H12BQ5HYM0 836 aaKnown RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 FIGLAQ6QHK4 219 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 ANKMY2Q8IV38 441 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 CNTN4Q8IWV2 1026 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 PALM2Q8IXS6 379 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 CPNE9Q8IYJ1 553 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 SYTL1Q8IYJ3 562 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 DNAJC22Q8N4W6 341 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 SLC38A9Q8NBW4 561 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 GIMAP7Q8NHV1 300 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 CD200R1Q8TD46 325 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 ZUFSPQ96AP4 578 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 NDNQ99608 321 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 DPH2Q9BQC3 489 aaPredicted RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 ERP44Q9BS26 406 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 FAM117AQ9C073 453 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 DPH5Q9H2P9 285 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 ACTL8Q9H568 366 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 TXLNGQ9NUQ3 528 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 PCMTD2Q9NV79 361 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 EURLQ9NYK6 297 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 SRPK3Q9UPE1 567 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 POLHQ9Y253 713 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 FARSAQ9Y285 508 aaKnown RBP16.23■□□□□ 0.19
SMN2-210ENST00000511812 KLHL20Q9Y2M5 609 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 TEX264Q9Y6I9 313 aa16.23■□□□□ 0.19
SMN2-210ENST00000511812 KRT87PA6NCN2 255 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 C9J4A7 227 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 MYO1CO00159 1063 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 ZSCAN9O15535 394 aaPredicted RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 RECKO95980 971 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 MCM3P25205 808 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 CMPK1P30085 196 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 RPA3P35244 121 aaPredicted RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 MRPS25P82663 173 aaKnown RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 ARHGAP19Q14CB8 494 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 TEDDM1Q5T9Z0 273 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 ATP1A1-AS1Q5TC04 95 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 GALNT7Q86SF2 657 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 SYVN1Q86TM6 617 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 MCATQ8IVS2 390 aaKnown RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 ZNF655Q8N720 491 aaPredicted RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 EXD3Q8N9H8 876 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 FBXO36Q8NEA4 188 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 DENND1AQ8TEH3 1009 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 APOBEC4Q8WW27 367 aaKnown RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 SMPDL3AQ92484 453 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 MIPEPQ99797 713 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 C17orf62Q9BQA9 187 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 NDC1Q9BTX1 674 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 SEMA4CQ9C0C4 833 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 SPRTNQ9H040 489 aaPredicted RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 ADNPQ9H2P0 1102 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 WHRNQ9P202 907 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 ZFATQ9P243 1243 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 MED16Q9Y2X0 877 aa16.22■□□□□ 0.19
SMN2-210ENST00000511812 UTP11Q9Y3A2 253 aaKnown RBP16.22■□□□□ 0.19
SMN2-210ENST00000511812 SPTBP11277 2137 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 PABPN1LA6NDY0 278 aaKnown RBP16.21■□□□□ 0.19
SMN2-210ENST00000511812 TARM1B6A8C7 271 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 RAD51CO43502 376 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 C1QL1O75973 258 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 AHSGP02765 367 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 RAB40ALP0C0E4 278 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 PSMB5P28074 263 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 RORAP35398 523 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 GRIA3P42263 894 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 GABRA4P48169 554 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 PNLIPRP1P54315 467 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 POLE2P56282 527 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 CKAP4Q07065 602 aaKnown RBP16.21■□□□□ 0.19
SMN2-210ENST00000511812 PDAP1Q13442 181 aaKnown RBP16.21■□□□□ 0.19
SMN2-210ENST00000511812 PTCHD3Q3KNS1 767 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 STEAP4Q687X5 459 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 RHBDD2Q6NTF9 364 aa16.21■□□□□ 0.19
SMN2-210ENST00000511812 ZNF517Q6ZMY9 492 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms