RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PFDN6O15212 129 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 CNOT3O75175 753 aaKnown RBP14.77□□□□□ -0.05
TPM3-219ENST00000509409 MGAT1P26572 445 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 NMBRP28336 390 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 FMO4P31512 558 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 KCNJ1P48048 391 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 EIF3BP55884 814 aaKnown RBP14.77□□□□□ -0.05
TPM3-219ENST00000509409 GRB7Q14451 532 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 MYBPC3Q14896 1274 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 PLEKHN1Q494U1 663 aaPredicted RBP14.77□□□□□ -0.05
TPM3-219ENST00000509409 TCTE1Q5JU00 501 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 FCRL6Q6DN72 434 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 CES3Q6UWW8 571 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 LRRC6Q86X45 466 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 Q8NA96 180 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 ZUFSPQ96AP4 578 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 SELENOSQ9BQE4 189 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 MENTQ9BUN1 341 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 LZTFL1Q9NQ48 299 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 CUTCQ9NTM9 273 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 TSR3Q9UJK0 312 aaKnown RBP14.77□□□□□ -0.05
TPM3-219ENST00000509409 CDC23Q9UJX2 597 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 MRFAP1Q9Y605 127 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 NFS1Q9Y697 457 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 PIKFYVEQ9Y2I7 2098 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 MAST4O15021 2626 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 DSCR3O14972 297 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 CEP104O60308 925 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 IPO13O94829 963 aaKnown RBP14.76□□□□□ -0.05
TPM3-219ENST00000509409 VAPBO95292 243 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 C1orf105O95561 183 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 FGGP02679 453 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 UMODP07911 640 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 RPS3P23396 243 aaKnown RBP eCLIP14.76□□□□□ -0.05
TPM3-219ENST00000509409 MCM3P25205 808 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 ITGA3P26006 1051 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 BDKRB1P46663 353 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 VSX2P58304 361 aaPredicted RBP14.76□□□□□ -0.05
TPM3-219ENST00000509409 GRM7Q14831 915 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 SIX1Q15475 284 aaPredicted RBP14.76□□□□□ -0.05
TPM3-219ENST00000509409 EIF2S3LQ2VIR3 472 aaKnown RBP14.76□□□□□ -0.05
TPM3-219ENST00000509409 FAM214AQ32MH5 1076 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 MRNIPQ6NTE8 343 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 DRICH1Q6PGQ1 229 aaPredicted RBP14.76□□□□□ -0.05
TPM3-219ENST00000509409 OVCH1Q7RTY7 1134 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 PPP1R32Q7Z5V6 425 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 MPP5Q8N3R9 675 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 ZADH2Q8N4Q0 377 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 PRR7Q8TB68 274 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 MAGEC3Q8TD91 643 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 TM9SF4Q92544 642 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 MIPEPQ99797 713 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 ILKAPQ9H0C8 392 aaPredicted RBP14.76□□□□□ -0.05
TPM3-219ENST00000509409 P2RY12Q9H244 342 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 SLC22A11Q9NSA0 550 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 TREX1Q9NSU2 369 aa14.76□□□□□ -0.05
TPM3-219ENST00000509409 TCP11X1B4DZS4 312 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 TARM1B6A8C7 271 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 GOLGA8KD6RF30 607 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 GOLGA8TH3BQL2 631 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 AGPSO00116 658 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 FKBP9O95302 570 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 ALBP02768 609 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 CHRM3P20309 590 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 CCNFP41002 786 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 GLRBP48167 497 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 SARNPP82979 210 aaKnown RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 MRPL49Q13405 166 aaKnown RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 CCSMST1Q4G0I0 132 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 C4orf17Q53FE4 359 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 WASHC2DQ5SRD0 308 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 YOD1Q5VVQ6 348 aaPredicted RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 LRRC8BQ6P9F7 803 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 CNSTQ6PJW8 725 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 SHISA6Q6ZSJ9 500 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 TMEM151BQ8IW70 566 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 IQCKQ8N0W5 287 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 CISD2Q8N5K1 135 aaKnown RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 METTL27Q8N6F8 245 aaPredicted RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 FKBP10Q96AY3 582 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 FAM136AQ96C01 138 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 C19orf60Q96EN9 201 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 MFSD3Q96ES6 412 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 KIFC1Q9BW19 673 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 SOX17Q9H6I2 414 aaPredicted RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 ZNF552Q9H707 407 aaPredicted RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 SYBUQ9NX95 663 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 ZC3H7BQ9UGR2 993 aaKnown RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 RUVBL2Q9Y230 463 aaKnown RBP14.75□□□□□ -0.05
TPM3-219ENST00000509409 B3GNT3Q9Y2A9 372 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 ZKSCAN5Q9Y2L8 839 aa14.75□□□□□ -0.05
TPM3-219ENST00000509409 LRRK2Q5S007 2527 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 NAV2Q8IVL1 2488 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 RP1L1Q8IWN7 2480 aaPredicted RBP14.74□□□□□ -0.05
TPM3-219ENST00000509409 A0A0J9YVX5 310 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 SRPX2O60687 465 aaPredicted RBP14.74□□□□□ -0.05
TPM3-219ENST00000509409 EIF2S1P05198 315 aaKnown RBP14.74□□□□□ -0.05
TPM3-219ENST00000509409 MMP11P24347 488 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 PSMB5P28074 263 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms