RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 ATAD3AQ9NVI7 634 aa12.73□□□□□ -0.37
CAST-223ENST00000508608 TRNAU1APQ9NX07 287 aaKnown RBP12.73□□□□□ -0.37
CAST-223ENST00000508608 VPS51Q9UID3 782 aa12.73□□□□□ -0.37
CAST-223ENST00000508608 GABRQQ9UN88 632 aa12.73□□□□□ -0.37
CAST-223ENST00000508608 CPQQ9Y646 472 aa12.73□□□□□ -0.37
CAST-223ENST00000508608 THSD7BQ9C0I4 1608 aa12.73□□□□□ -0.37
CAST-223ENST00000508608 ARVCFO00192 962 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 TBL1XO60907 577 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 LATS1O95835 1130 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 TRBC1P01850 177 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ALOX5P09917 674 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ACPPP15309 386 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 PFKLP17858 780 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 MZF1P28698 734 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 SPAM1P38567 509 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 OXA1LQ15070 435 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 CST9Q5W186 159 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 RNF180Q86T96 592 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 SERPINA11Q86U17 422 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 P2RY8Q86VZ1 359 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 BEND7Q8N7W2 519 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 SELENOMQ8WWX9 145 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 NELL1Q92832 810 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 CMTM7Q96FZ5 175 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ZNF641Q96N77 438 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 CASD1Q96PB1 797 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 TNKS2Q9H2K2 1166 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 RIBC2Q9H4K1 309 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 DUSP21Q9H596 190 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 KLHL42Q9P2K6 505 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 RPS6KA6Q9UK32 745 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ANAPC1Q9H1A4 1944 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 PABPN1LA6NDY0 278 aaKnown RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 EIF3FO00303 357 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 RFXANKO14593 260 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 XPNPEP2O43895 674 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ZNF682O95780 498 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 PDYNP01213 254 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 NR4A1P22736 598 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ST13P50502 369 aaKnown RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 SLC35A2P78381 396 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ABRQ12979 859 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 CPSF6Q16630 551 aaKnown RBP eCLIP12.72□□□□□ -0.37
CAST-223ENST00000508608 PGS1Q32NB8 556 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ERICH5Q6P6B1 374 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 PRSS55Q6UWB4 352 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 CHPFQ8IZ52 775 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 NXPE1Q8N323 547 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 PGBD3Q8N328 593 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 DCAF4L2Q8NA75 395 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 TAMM41Q96BW9 452 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ALPK1Q96QP1 1244 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 NEURL2Q9BR09 285 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 TMEM175Q9BSA9 504 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
CAST-223ENST00000508608 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 EXD2Q9NVH0 621 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 ARL15Q9NXU5 204 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 STOML2Q9UJZ1 356 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 DLGAP4Q9Y2H0 992 aa12.72□□□□□ -0.37
CAST-223ENST00000508608 SOCS5O75159 536 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 GSNP06396 782 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 MYCLP1P12525 358 aaPredicted RBP12.71□□□□□ -0.37
CAST-223ENST00000508608 FPR1P21462 350 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 PTPN6P29350 595 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 DNAJA1P31689 397 aaKnown RBP12.71□□□□□ -0.37
CAST-223ENST00000508608 GGT5P36269 586 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 NSG1P42857 185 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 ACLYP53396 1101 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 PHC1P78364 1004 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 GTF2H3Q13889 308 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 BOP1Q14137 746 aaKnown RBP12.71□□□□□ -0.37
CAST-223ENST00000508608 NPTX1Q15818 432 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 KDM4DQ6B0I6 523 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 SLC8B1Q6J4K2 584 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 GALNT5Q7Z7M9 940 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.37
CAST-223ENST00000508608 GLMNQ92990 594 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 MTFMTQ96DP5 389 aaKnown RBP12.71□□□□□ -0.37
CAST-223ENST00000508608 MAGEB10Q96LZ2 347 aaPredicted RBP12.71□□□□□ -0.37
CAST-223ENST00000508608 INPP5KQ9BT40 448 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 MRPL9Q9BYD2 267 aaKnown RBP12.71□□□□□ -0.37
CAST-223ENST00000508608 FBXO8Q9NRD0 319 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 GMPPBQ9Y5P6 360 aa12.71□□□□□ -0.37
CAST-223ENST00000508608 NPIPB8E9PQR5 432 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 FABP3P05413 133 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.38
CAST-223ENST00000508608 BPIP17213 487 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 HPCAL1P37235 193 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 TRPC1P48995 793 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 RPIAP49247 311 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 PTPN5P54829 565 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 CDH18Q13634 790 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 CYP2A13Q16696 494 aa12.71□□□□□ -0.38
CAST-223ENST00000508608 SYT6Q5T7P8 510 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms