RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PDIA2Q13087 525 aaKnown RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 NFATC2Q13469 925 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 HLTFQ14527 1009 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 NFATC4Q14934 902 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 LONRF1Q17RB8 773 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 FASTKD1Q53R41 847 aaKnown RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 CT83Q5H943 113 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 FNBP1LQ5T0N5 605 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM182AQ5T1J6 154 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 STEAP4Q687X5 459 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 NXNQ6DKJ4 435 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZDHHC24Q6UX98 284 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 UNQ6494/PRO21346Q6UXR6 183 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 MACC1Q6ZN28 852 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 GCNT7Q6ZNI0 430 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 Q6ZSR6 202 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 KIAA0408Q6ZU52 694 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 GALNT7Q86SF2 657 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 LRRC6Q86X45 466 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PALM2Q8IXS6 379 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZBED8Q8IZ13 594 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 DDHD1Q8NEL9 900 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 OR13C4Q8NGS5 318 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 OR4L1Q8NH43 312 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 GSDMBQ8TAX9 411 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 IFT81Q8WYA0 676 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PIGKQ92643 395 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 KLK6Q92876 244 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 SCAMP4Q969E2 229 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 COX14Q96I36 57 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 WDR92Q96MX6 357 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 SMIM14Q96QK8 99 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 COPS8Q99627 209 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 RHOXF2Q9BQY4 288 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 FAM167BQ9BTA0 163 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 ASB8Q9H765 288 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 EBF2Q9HAK2 575 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 BARX1Q9HBU1 254 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 BPIFA1Q9NP55 256 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 DNAJC28Q9NX36 388 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 NSMCE4AQ9NXX6 385 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 KCMF1Q9P0J7 381 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 CRLS1Q9UJA2 301 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 GPR34Q9UPC5 381 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 SLC17A4Q9Y2C5 497 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCDHGA9Q9Y5G4 932 aaKnown RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCDHGA8Q9Y5G5 932 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCDHGA7Q9Y5G6 932 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCDHGA6Q9Y5G7 932 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCDHGA3Q9Y5H0 932 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 GPR45Q9Y5Y3 372 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 RPS6KL1Q9Y6S9 549 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 DGKBQ9Y6T7 804 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 R4GN57 208 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 GVINP1Q7Z2Y8 2422 aa5.4□□□□□ -1.55
HMGB1P44-201ENST00000508597 MYLKQ15746 1914 aa5.4□□□□□ -1.55
HMGB1P44-201ENST00000508597 PLXNB3Q9ULL4 1909 aa5.4□□□□□ -1.55
HMGB1P44-201ENST00000508597 VPS13AQ96RL7 3174 aa5.4□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZFC3H1O60293 1989 aaKnown RBP5.4□□□□□ -1.55
HMGB1P44-201ENST00000508597 ARHGEF17Q96PE2 2063 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 WDR87Q6ZQQ6 2873 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TP53BP1Q12888 1972 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF292O60281 2723 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 IGLV3-16A0A075B6K0 115 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 A0A0A6YYJ9 748 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZCWPW2A0A1B0GU75 182 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 C17orf113A0A1B0GUU1 675 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CCDC162PA2VCL2 907 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 H3BMM5 538 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 GAPDHSO14556 408 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CHUKO15111 745 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 KPNA5O15131 536 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CD3EAPO15446 510 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 AP2A2O94973 939 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 APOL3O95236 402 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 VAPBO95292 243 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CNOT4O95628 575 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CER1O95813 267 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 SOD1P00441 154 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 GOT2P00505 430 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TNFP01375 233 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC4A1P02730 911 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CSF2P04141 144 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PCCBP05166 539 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF883P0CG24 379 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF7P17097 686 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 MSH3P20585 1137 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 RPS3P23396 243 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ACRV1P26436 265 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 NMBRP28336 390 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ECHS1P30084 290 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 FOXN2P32314 431 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 STX2P32856 288 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ELK3P41970 407 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 MAGEA4P43358 317 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ARCN1P48444 511 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ARRB1P49407 418 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CARSP49589 748 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms