RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 KPNA5O15131 536 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 ZNF185O15231 689 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 ESR1P03372 595 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 PYGBP11216 843 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 CHRM3P20309 590 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 OTX2P32243 289 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 GCGRP47871 477 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 MLLT10P55197 1068 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 YBX1P67809 324 aaKnown RBP13.71□□□□□ -0.21
RAB28-205ENST00000508274 FOXK1P85037 733 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 FASTKQ14296 549 aaKnown RBP13.71□□□□□ -0.21
RAB28-205ENST00000508274 ANKRD20A4Q4UJ75 823 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 ACSBG2Q5FVE4 666 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.71□□□□□ -0.21
RAB28-205ENST00000508274 ZNF470Q6ECI4 717 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 NEPROQ6NW34 567 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 TLDC1Q6P9B6 456 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.21
RAB28-205ENST00000508274 DENND6AQ8IWF6 608 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 PROKR1Q8TCW9 393 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 SLC22A18Q96BI1 424 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 OSBPL9Q96SU4 736 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 TCF12Q99081 682 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 SLC30A3Q99726 388 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 MIPEPQ99797 713 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 RAB11FIP5Q9BXF6 653 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 KCNF1Q9H3M0 494 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 MLXIPLQ9NP71 852 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 TXLNGQ9NUQ3 528 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 SRPK3Q9UPE1 567 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 PLAAQ9Y263 795 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 PADI2Q9Y2J8 665 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 NUP210LQ5VU65 1888 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 HEATR5BQ9P2D3 2071 aa13.71□□□□□ -0.21
RAB28-205ENST00000508274 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 FAM237BA0A1B0GVD1 139 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 A0A1W2PPV9 198 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 ARHGEF33A8MVX0 844 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 PHF2O75151 1096 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 MATN4O95460 622 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 MLNP12872 115 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 PKMP14618 531 aaKnown RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 PAMP19021 973 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 ITGAXP20702 1163 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 PGDP52209 483 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 ADARP55265 1226 aaKnown RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 DCDP81605 110 aaKnown RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 CTBP1Q13363 440 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 TTC23LQ6PF05 361 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 NAT8LQ8N9F0 302 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 MCUQ8NE86 351 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 FDCSPQ8NFU4 85 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 FOPNLQ96NB1 174 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 NDC1Q9BTX1 674 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 DHRS4Q9BTZ2 278 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 NUDT9Q9BW91 350 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 GRPEL1Q9HAV7 217 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 FBXO6Q9NRD1 293 aaPredicted RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 SLC22A11Q9NSA0 550 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 TRMT1Q9NXH9 659 aaKnown RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 IFT80Q9P2H3 777 aaPredicted RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 NDOR1Q9UHB4 597 aa13.71□□□□□ -0.22
RAB28-205ENST00000508274 GPN3Q9UHW5 284 aaPredicted RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 PTRH2Q9Y3E5 179 aaKnown RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 PCDHGA9Q9Y5G4 932 aaKnown RBP13.71□□□□□ -0.22
RAB28-205ENST00000508274 DOPEY2Q9Y3R5 2298 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 A6NL46 340 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 H3BMM5 538 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 MASP2O00187 686 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 KIF5CO60282 957 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 CTSVO60911 334 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 CEACAM4O75871 244 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 ALAS2P22557 587 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 MAGEA3P43357 314 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 CUL1Q13616 776 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 RAPSNQ13702 412 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 KLHL38Q2WGJ6 581 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 NADK2Q4G0N4 442 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 NKAIN1Q4KMZ8 207 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 MRPL14Q6P1L8 145 aaKnown RBP13.7□□□□□ -0.22
RAB28-205ENST00000508274 TTLL10Q6ZVT0 673 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 MRGPREQ86SM8 312 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 RAB43Q86YS6 212 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 DTWD1Q8N5C7 304 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 OR2L3Q8NG85 312 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 GIMAP7Q8NHV1 300 aa13.7□□□□□ -0.22
RAB28-205ENST00000508274 NAP1L3Q99457 506 aaPredicted RBP13.7□□□□□ -0.22
RAB28-205ENST00000508274 XAB2Q9HCS7 855 aaKnown RBP13.7□□□□□ -0.22
RAB28-205ENST00000508274 INTS7Q9NVH2 962 aaKnown RBP13.7□□□□□ -0.22
RAB28-205ENST00000508274 INTS10Q9NVR2 710 aaKnown RBP13.7□□□□□ -0.22
RAB28-205ENST00000508274 MDC1Q14676 2089 aaKnown RBP13.69□□□□□ -0.22
RAB28-205ENST00000508274 PRRC2CQ9Y520 2896 aaKnown RBP13.69□□□□□ -0.22
RAB28-205ENST00000508274 PTPN13Q12923 2485 aa13.69□□□□□ -0.22
RAB28-205ENST00000508274 CTAGE9A4FU28 777 aa13.69□□□□□ -0.22
RAB28-205ENST00000508274 E5RI56 91 aa13.69□□□□□ -0.22
RAB28-205ENST00000508274 PFDN6O15212 129 aa13.69□□□□□ -0.22
RAB28-205ENST00000508274 UMODP07911 640 aa13.69□□□□□ -0.22
RAB28-205ENST00000508274 ATP5DP30049 168 aa13.69□□□□□ -0.22
RAB28-205ENST00000508274 CCNFP41002 786 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms