RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 FAM13CQ8NE31 585 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 OR4K2Q8NGD2 314 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 OR2W6PQ8NHA6 318 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 SLC35B2Q8TB61 432 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 CCDC110Q8TBZ0 833 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 GRK7Q8WTQ7 553 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 ART4Q93070 314 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 CXorf40BQ96DE9 158 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 MED8Q96G25 268 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 ZDHHC12Q96GR4 267 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 LINC00615Q96LM1 132 aaPredicted RBP7.83□□□□□ -1.16
SCN1A-207ENST00000507401 C9orf72Q96LT7 481 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 FICDQ9BVA6 458 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 TBC1D10AQ9BXI6 508 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 FRMD8P1Q9BZ68 369 aaPredicted RBP7.83□□□□□ -1.16
SCN1A-207ENST00000507401 PITPNM3Q9BZ71 974 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 TRIT1Q9H3H1 467 aaKnown RBP7.83□□□□□ -1.16
SCN1A-207ENST00000507401 ASB8Q9H765 288 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 SEMA5BQ9P283 1151 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 PILRAQ9UKJ1 303 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 DNAJC16Q9Y2G8 782 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 B3GALT1Q9Y5Z6 326 aa7.83□□□□□ -1.16
SCN1A-207ENST00000507401 GCN1Q92616 2671 aaKnown RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 C17orf113A0A1B0GUU1 675 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 TMEM120BA0PK00 339 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 MGAT4DA6NG13 374 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ERI2A8K979 691 aaKnown RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 A8MU76 341 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 H7C0S8 307 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 POLR1CO15160 346 aaPredicted RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 TTI1O43156 1089 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 OIP5O43482 229 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 LDB2O43679 373 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 BUD23O43709 281 aaKnown RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PFDN1O60925 122 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 FKBP6O75344 327 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 C1QL1O75973 258 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PRAMEF1O95521 474 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 EIF2S1P05198 315 aaKnown RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 TROVE2P10155 538 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 SFTPCP11686 197 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PSMA3P25788 255 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PSMB4P28070 264 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 MAP2K3P46734 347 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PPM1FP49593 454 aaPredicted RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 CTSCP53634 463 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 CYLC2Q14093 348 aaPredicted RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 RCN2Q14257 317 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 GPR18Q14330 331 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 SPARCL1Q14515 664 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 SLC29A2Q14542 456 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 IL11RAQ14626 422 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PTPRCAPQ14761 206 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 CLCA4Q14CN2 919 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 RPE65Q16518 533 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 P3H1Q32P28 736 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 TRMT5Q32P41 509 aaKnown RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 BCL7AQ4VC05 210 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 CCDC92Q53HC0 331 aaPredicted RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 FNBP1LQ5T0N5 605 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 C1QTNF12Q5T7M4 302 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ANKS6Q68DC2 871 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 AADACL2Q6P093 401 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 KLHL35Q6PF15 583 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ACAD11Q709F0 780 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 CCDC80Q76M96 950 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 SNX20Q7Z614 316 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 LINC00523Q86TU6 105 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 FAM129CQ86XR2 697 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 TRIM42Q8IWZ5 723 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF843Q8N446 348 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 SMYD1Q8NB12 490 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 OR2L2Q8NH16 312 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 KLHL6Q8WZ60 621 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ULK4Q96C45 1275 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 RTP4Q96DX8 246 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ABHD17AQ96GS6 310 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 TBL1YQ9BQ87 522 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 CCM2Q9BSQ5 444 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 EFHD1Q9BUP0 239 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 EPB41L4BQ9H329 900 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF768Q9H5H4 540 aaKnown RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 LRRC40Q9H9A6 602 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PCMTD2Q9NV79 361 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 GALNT8Q9NY28 637 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 FETUBQ9UGM5 382 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 TMEM184BQ9Y519 407 aaPredicted RBP7.82□□□□□ -1.16
SCN1A-207ENST00000507401 ARL5AQ9Y689 179 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 SLC30A1Q9Y6M5 507 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 PIEZO2Q9H5I5 2752 aa7.82□□□□□ -1.16
SCN1A-207ENST00000507401 SDK2Q58EX2 2172 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 HELZ2Q9BYK8 2649 aaKnown RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 ARHGAP10A1A4S6 786 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 OR2AG2A6NM03 316 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 OR52A4PA6NMU1 304 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 F5H423 210 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-207ENST00000507401 AGRPO00253 132 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 METTL18O95568 372 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 FGGP02679 453 aa7.81□□□□□ -1.16
SCN1A-207ENST00000507401 GSTM1P09488 218 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms